Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00386 ATGCAGAGGAGGTATCCGGAGAGGACGAACTCCATGAGGGAGAAAAGGGGCTTGGAGGGTGGAGAAGATGAGCTGCCAGAGCGAAAGAGACCAGCTCTAGCTAGTGTGATTGTAGAAGCCCTGAAGGTGGATAGTTTACAAAAGCTCTGCTCATCATTGGAACCAATTCTCCGTAGAGTGGTTAGTGAGGAAGTGGAACGTGCTTTGGCTAAGATAGGTCCTGCTAGAATTACTGGAAGGTCTTCTCCTAAAAGGATTGAAGGTCCTGATGGAAGAAACTTGCAACTGCACTTTAGGACTAGATTGTCTCTTCCCCTATTCACTGGAGGGAAAGTGGAAGGTGAACAGGGTGCAACAATCCATGTCGTTCTGGTTGATGCCAACACAGGCCAATTAGTAACGTCTGGTCAGGAAGCCTTGTCTAAATTGGACATTGTGGTACTTGAAGGTGATTTTAACAATGAAGATGATGAAGATTGGACAGAGGAAGAATTTGAAAGCCACGTGGTTAAAGAGCGTGAAGGTAAGAGGCCTCTGTTGACTGGTGACTTGCAGGTTACACTCAAGGAAGGTGTTGGAACACTAGGGGATCTGACCTTCACTGATAATTCAAGTTGGATTAGGAGCAGAAAGTTCAGACTTGGATTAAAGGTGGCTTCAGGATTTTGTGAAGGTGTACGTATTCGTGAAGCCAAAACTGAAGCTTTTACAGTTAAAGATCACCGAGGAGAATTGTATAAAAAACATTACCCACCTGCATTAAATGATGAGGTGTGGAGATTGGAGAAGATTGGAAAGGATGGTTCATTTCACAAGCGGCTAAACAAAAATCAAATATTCTCAGTTGAAGATTTTCTCCGAATGGTGGTTCGAGATTCTCAAAAGCTACGGAGCATCCTTGGAAGTGGTATGTCAAATAAGATGTGGGATGCTCTCCTGGAACATGCTAAGACCTGTGTCCTGGGCGGGAAGCTGTATATTTATTATCCAGAGGAAACAAGAAATGTTGGTGTTGTTTTCAACAATATCTATGAGCTCAATGGACTGATTACAGGGGAACAATACTTTTCTGCTGATTCTCTGTCTGATAGCCAGAAGGTTTATGTAGATACACTAGTGAACAAAGCATATGAAAATTGGAATCAAGTCGTAGAGTATGATGGCAAGTCACTTTTGAATTCTAAGCAGTCTAAGAAGTCGAATGCATCCCGAAATGACTTTCAAGGTGGTCATCTTGATCTTTCTAATACTCTAGATCATGGGTCAATCCCCCGCATGCCAGTGTCAGTTCAGCCTCAGCAGCCTGTAATGGATTCAGGACTCTCAGTTGCAGGGTATGATGATAATGCCGCAAGATATTCAACCCAGCCTCAGTTTGTGAATTCAACTTCTCGACCACAGTTTGACAACTCTCAATATACTTCTAATGAGTTGATTGGCAATTCTAACCAAGTTCATATCTCAAGAAATGACAGTAATGCTTTTGGTTTGGCTCTTGCTCCTCCGCAAGCATCATCTTCAGGGTTCCAGATGCTTGGTTCTTCTATTCAGGAAACTAATCTGAATCCATTTGAATGGTCGAACAATAGAGACAAGGGAGCTGATGACTTCTTTTCAGAGGACGAGATTCGTATGAGAAGTCATGAACTGCTTGAAAATGAAGACATGCAACATTTGTTGCGAATGTTTAGCATGGGAGGGCATGCATCTGGTAACGTCAATGATGAGGGCTTTTCATTCCCATCATTCATGCCTTCACCAATGCCAAATTTCGACGATCGCAGCCGTTCTGGAAAAGCTGTGGTGGGTTGGCTGAAGATCAAAGCTGCAATGAGGTGGGGCTTCTTCATCAGGAAGAAAGCAGCTGAGAGACGCGCACAGCTTGTCGAGTTAGATGAGGAATAG 1905 43.52 MQRRYPERTNSMREKRGLEGGEDELPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKIGPARITGRSSPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQGATIHVVLVDANTGQLVTSGQEALSKLDIVVLEGDFNNEDDEDWTEEEFESHVVKEREGKRPLLTGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGFCEGVRIREAKTEAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKNQIFSVEDFLRMVVRDSQKLRSILGSGMSNKMWDALLEHAKTCVLGGKLYIYYPEETRNVGVVFNNIYELNGLITGEQYFSADSLSDSQKVYVDTLVNKAYENWNQVVEYDGKSLLNSKQSKKSNASRNDFQGGHLDLSNTLDHGSIPRMPVSVQPQQPVMDSGLSVAGYDDNAARYSTQPQFVNSTSRPQFDNSQYTSNELIGNSNQVHISRNDSNAFGLALAPPQASSSGFQMLGSSIQETNLNPFEWSNNRDKGADDFFSEDEIRMRSHELLENEDMQHLLRMFSMGGHASGNVNDEGFSFPSFMPSPMPNFDDRSRSGKAVVGWLKIKAAMRWGFFIRKKAAERRAQLVELDEE 634
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1917225 1923814 - Carg15253-RA Car10g00386 155288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00386 634 MobiDBLite consensus disorder prediction 395 424 - -
Car10g00386 634 Pfam Calmodulin binding protein central domain 253 319 IPR046830 -
Car10g00386 634 MobiDBLite consensus disorder prediction 1 26 - -
Car10g00386 634 Pfam Calmodulin binding protein C-terminal domain 324 386 IPR046829 -
Car10g00386 634 MobiDBLite consensus disorder prediction 395 412 - -
Car10g00386 634 Pfam Calmodulin binding protein-like N-terminal domain 94 241 IPR046831 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00386 Car11g00373 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00386 Car-Chr10:1917225 Car13g00849 Car-Chr13:9091912 8.04E-103 dispersed
Car10g00386 Car-Chr10:1917225 Car11g00373 Car-Chr11:2042077 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00386 - - cmo:103494282 1159.82