Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00392 ATGGGATCGTCTTTCAGTTGCTGTGGCTCTGAAAAAATAGACCAGGGGTTCGTTGGAGGGAACAGTTCGTGGAGGATGTTTACGTACAAGGAGCTGCATGCGGCCACGAATGGTTTCCATGAGGACAACAAGCTGGGAGAAGGAGGATTTGGAAGTGTTTATTGGGGCAAGACCAGCGATGGTCTTCAGATAGCGGTGAAGAAGCTGAAAGCGATGAATTATAAGGCAGAGATGGAGTTTGCAGTGGAAGTGGAAGTGCTGGCGAGGCTGAGGCATAAGAACTTGTTGGGGCTGAGGGGTTACTGTGTGGGGACTGATCAGAGGCTTATTGTTTATGATTACATGCCAAATCTCAGCTTGCTCTCCCATCTCCATGGCCAATTTGCTTCTGAAGCTCACTTGGATTGGAAAAGAAGAATGAAGATCGCTCTTGGCTCTGCTGAAGGCATTTTGTATTTGCACCAGGAAGTAAGACCCCACATAATCCACAGAGACATAAAAGCAAGCAATGTGCTGTTAGATTCAGATTTTGAGCCACTAGTAGCTGATTTCGGGTTTGCAAAACTAATACCAGAGGGTGTGAGCCACATGACAACTCGAGTCAAAGGGACCTTAGGGTATCTTGCTCCTGAATATGCCATGTGGGGCAAAGTCTCCGAGAGCTGTGACGTTTTCAGCTATGGGATTCTTTTGCTAGAGCTCATTACGGGAAGGAAGCCAATCGAAAGACTCCCTGGTGGAGCAAAGAGAACCATTTCTGAGTGGATCAACACCACAATAAACAAAGACAGGTTCAAAGACTTGGCGGATAGGAAGCTGAAGGGACACCTCAATTGGAAACAGTTCGAACATGTATTGCATTTGGCAATCATGTGCGTGCAGACCGAACCAGATAAGCGCCCTACTATCAGAGAAGTGGTAGAATGTTTGAAGGCCTTGATGGCTGATGGGGAACACAAGGGAAGCATCAAGCCCATGCTAATGAGTATCTCAAGTGTTAGATGTGATAATGATGAAGATGAGCAGGCAAGCAGAGAACATCGTGGAGGTGGAGATCAAGAGAGTTTCGATTATGGGGTTTTTAGTGCCATTGAGGAGCAGAAGATGAGAGATCCTTACAAACACCATGAAAATTTGAGAATGCATGCTTAA 1152 46.18 MGSSFSCCGSEKIDQGFVGGNSSWRMFTYKELHAATNGFHEDNKLGEGGFGSVYWGKTSDGLQIAVKKLKAMNYKAEMEFAVEVEVLARLRHKNLLGLRGYCVGTDQRLIVYDYMPNLSLLSHLHGQFASEAHLDWKRRMKIALGSAEGILYLHQEVRPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVFSYGILLLELITGRKPIERLPGGAKRTISEWINTTINKDRFKDLADRKLKGHLNWKQFEHVLHLAIMCVQTEPDKRPTIREVVECLKALMADGEHKGSIKPMLMSISSVRCDNDEDEQASREHRGGGDQESFDYGVFSAIEEQKMRDPYKHHENLRMHA 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1946187 1948773 - Carg15259-RA Car10g00392 155294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00392 383 ProSiteProfiles Protein kinase domain profile. 39 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car10g00392 383 MobiDBLite consensus disorder prediction 335 353 - -
Car10g00392 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Car10g00392 383 Pfam Protein kinase domain 39 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car10g00392 383 MobiDBLite consensus disorder prediction 335 356 - -
Car10g00392 383 ProSitePatterns Protein kinases ATP-binding region signature. 45 68 IPR017441 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g00624 Car10g00392 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00392 Car-Chr10:1946187 Car15g00207 Car-Chr15:1142382 7.59E-87 dispersed
Car14g01192 Car-Chr14:10453312 Car10g00392 Car-Chr10:1946187 5.03E-17 dispersed
Car10g00392 Car-Chr10:1946187 Car01g00134 Car-Chr1:679259 3.33E-107 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89125 PF00069 Pkinase 3.40E-45 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00392 - - csv:101207264 632.484