Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00409 ATGGTTCCTAAACTCCTCTGTTTGATCATTCTCTCTTCTGCCTTTCTCTGCCTTTCTTATGAACCTCGGAACCCTGAAGTGCAAGCTCTGATCAATTTGAAGACGGCATTGAATGATCCGCACGGCGTGCTCAGCAATTGGGATGAGGACTCGGTGGACCCTTGTAGCTGGGCAATGATCACCTGCTCCCCTGAGAACCTCGTTATAGGACTGGGAGCTCCGAGCCAGTCTCTTTCTGGAAGCTTGTCTGGAGCGATTGGGAACCTCACTAATCTTCGCCAAGTGCTGCTGCAGAACAACAACATTTCCGGTCCAATTCCCATTGAACTTGGAGCTCTCCCGTTGCTGCAAACACTAGATCTCTCTAACAATCGGTTCTCGGGCCCAATACCAGCATCTTTTGCTCAACTGAATGGTCTACGCTATCTGAGGGTGAACAATAATAGCTTGTCCGGGCCTTTTCCCTCGTCTTTGGCCAAAATTCCCCAGCTTGCTTTCTTGGACTTGTCTTTTAACAATCTCAGTGGACCAGTGCCTGTGTTTCCAGCCAGAACATTCAATGTGGTGGGAAATCCAATGATATGTGGAAATAGTCCTAATGAAGGTTGCTCTGGCTCAGCCAACGCCGTTCCTCTTTCTTTCTCTCTAGAATCAGCCCCTGGAAGACTCAGGTCCAAAAGAATAGCAGTGGCACTTGGGGTCAGCCTCAGCTGTGCGTTTCTGATAATCCTAGCACTTGGAATTCTGTGGCGCAGAAAAACTCAGAAGACTAAAACAATCCTAGACTTCAATGTACACAATCAAGAAGTTGGCCTTATGCGCTTAGGCAACCTCAGAAACTTCACTTTCAAGGAACTCCAGTTAGCAACAGACCATTTTAGTTCCAAAAATATACTTGGGGCTGGAGGCTTTGGTAATGTGTACAAGGGAAAGCTAGGAGATGGGACTATGGTGGCAGTCAAACGGCTAAAAGATGTAACGGGTACTACTGGAGAGTCCCAGTTCCGCACAGAATTAGAGATGATTAGTCTTGCAGTTCATCGCAATTTGCTTCGCTTAATTGGTTATTGTGCCACTTCTCACGAGAGGCTCTTGGTGTACCCATACATGTCAAATGGCAGTGTAGCTTCCAGGCTCAGAGGAAAACCAGCCTTAGACTGGAACACGAGGAAGAGAATAGCAATTGGAGCAGCCAGGGGTCTGCTGTACCTCCACGAGCAATGTGATCCTAAGATAATCCATAGAGATGTGAAGGCCGCCAATGTGCTTCTAGATGACTACTGCGAAGCCGTAGTTGGTGATTTTGGACTTGCAAAGCTTCTTGACCATGCTGACTCTCATGTGACCACTGCTGTTCGTGGCACAGTTGGGCACATCGCTCCGGAGTATCTTTCAACTGGCCAGTCTTCTGAGAAGACAGATGTGTTTGGGTTTGGCATTCTTTTGATAGAGCTAATTACTGGAATGCGAGCTCATGAACATGGGAAAACAACTAACCAAAAGGGCGCAATGCTTGAGTGGGTGAAAAAGATACAACAGGAAAAGAAAGTGGAATTGCTTGTGGACAGAGAGCTAGGCAACAACTATGATCAGATTGAAGTTGGGGAAATGTTGCAAGTGGCTCTTCTTTGCACTCAGTATTTACCTGCTCACCGTCCCAAGATGTCGGAGGTGGTCCGAATGCTTGAAGGGGATGGCCTTGTTGAGAAATGGGCTGCTTCCCACACCCATAATGACTTAAATGTCAACCTCTTTCATTCACGGAACAGCTGCAAAAGTTCATACAATCCCACAAATGCATTGAAGAGTAACGGCAATGATCATTCAAGCATGTTAAGTTTGACATTGGACGATGACGAGGAGGAGCGATCTTTAGACTCCTATGCCATGGAACTCTCCGGTCCAAGATAG 1911 46.94 MVPKLLCLIILSSAFLCLSYEPRNPEVQALINLKTALNDPHGVLSNWDEDSVDPCSWAMITCSPENLVIGLGAPSQSLSGSLSGAIGNLTNLRQVLLQNNNISGPIPIELGALPLLQTLDLSNNRFSGPIPASFAQLNGLRYLRVNNNSLSGPFPSSLAKIPQLAFLDLSFNNLSGPVPVFPARTFNVVGNPMICGNSPNEGCSGSANAVPLSFSLESAPGRLRSKRIAVALGVSLSCAFLIILALGILWRRKTQKTKTILDFNVHNQEVGLMRLGNLRNFTFKELQLATDHFSSKNILGAGGFGNVYKGKLGDGTMVAVKRLKDVTGTTGESQFRTELEMISLAVHRNLLRLIGYCATSHERLLVYPYMSNGSVASRLRGKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDYCEAVVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLIELITGMRAHEHGKTTNQKGAMLEWVKKIQQEKKVELLVDRELGNNYDQIEVGEMLQVALLCTQYLPAHRPKMSEVVRMLEGDGLVEKWAASHTHNDLNVNLFHSRNSCKSSYNPTNALKSNGNDHSSMLSLTLDDDEEERSLDSYAMELSGPR 636
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2041851 2046000 - Carg10018-RA Car10g00409 155311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00409 636 ProSitePatterns Protein kinases ATP-binding region signature. 299 321 IPR017441 GO:0005524
Car10g00409 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Car10g00409 636 Pfam Leucine rich repeat 115 174 IPR001611 GO:0005515
Car10g00409 636 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Car10g00409 636 MobiDBLite consensus disorder prediction 596 612 - -
Car10g00409 636 ProSiteProfiles Protein kinase domain profile. 293 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car10g00409 636 Pfam Protein kinase domain 294 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car10g00409 636 MobiDBLite consensus disorder prediction 596 636 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00409 Car-Chr10:2041851 Car15g00214 Car-Chr15:1181391 0 dispersed
Car10g00409 Car-Chr10:2041851 Car02g00878 Car-Chr2:6273457 5.66E-72 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89126 PF00069 Pkinase 7.60E-43 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00409 - - cmax:111485761 1236.09