Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car10g00431 | ATGGCGGAGCGTCAATGTTTTGAAACTGACCAACTTGGAAGCTCGAAGGTTACTGCTGGGCTAGAGGACGACGAAGAAGAAATGGAAGATTCGGAGGATGAATCAGAGGTGGAGTTGGAAGATGGAGGAGCGTTGAATGAGTTGCAACCGGTTGAGTCGAGGATCGATTCGTCGGTTACTGAAGCTGCGGCGAGGGAGTCTCCTTCTGAAACCCTAACGGCGCCTTCTGCGAATCACTCCTCGGAGAACGGTTTGCCCGTCGATTCTGCTGCGCAGTCACTCGAAGAAGCTGAATTGAAGCAATCTCCATCTTCCTGCCATGAGCCTTTGGCAGTTGAAGCAACCCAGACAGATAAGGTGCAAGAACAAAGCCAGCTTCAGTTGTCAATATATAAAGGACCTGATCCGGAACAATCACCAACTTCTGTTACCCAGTCTATCTCATCCTCCGCAAGTCCAAGTTTATCCAAACATAAGCTGTCACCTAAGAAGGTCCAGAAAGAATGTAAGCCAGAGCCAAGCCAGAAAAATTCTTCCAACCATAAAACTGCATCATCGGTTCCCAATGTTAGGACACCTGCTTCTGATGGTTACAATTGGAGAAAATATGGTCAGAAGCAAGTGAAGAGTCCTAAGGGTTCGCGTAGCTATTACAAGTGTACATATTCTGAATGCTGTGCTAAGAAGATAGAATGTTGTGATCACTCAGGCCATAGAACAGAGATTGTTTACCGAAGCCAACATAGCCACGATCCACCTAGGATGATTAGCAACCCCAAGGAAAGACAGCTTGTGCCATATGTTGAGCCTGTAGTTAAGCAAATCATTACAGAACATTCCAGAAGAGTAATTAATGATTCAGATCCTCCCACGCCTTCTAAAGAACCTTCACGGGAAACAGCTTCAGTCCTTGTAAGGAAACGACAGTACTCGAGTGACTCTGATGGAAATGATGAATTTAAAATCAAAGATGAGAATGATGGCGAACCAGAGACAAAACAAAAAGTTAAGAAAAGTAGTGCGGGATATTCAGGTACTCCCTTAAAACCTGGAAAGAAGCCGAAATTTGTGGTGCATGCAGCGGGTGACGTGGGAATCTCGGGCGACGGATACAGATGGCGCAAGTATGGTCAGAAAATGGTGAAAGGAAGTCCTCATCCCAGGAACTACTACCGCTGTACCTCTGCTGGGTGTCCAGTCCGTAAGCACATCGAATCAGCAGTAGAAAATCCATATGCAGTGATTATAACATACAAGGGAGTTCATGATCACGACATGCCTGTACCGAAGAAGCGACACAGTCCACCAAGTGCTCCTCATATAGCTGCTGCAGCTCCAGCCTCCATGAGCAATACGCAACCGAAGACAACAGACTTAACCGAGAACCAAATTTCTTCAACACAGTGGTCTGTGGATGCTGAAGGAGAATTGACTGGTGAGGCCTTGGAGCTTGGAGGTGAGAAGGCAATGGAATCTGCTCGAACACTTTTGAGTATCGGATTTGAAATCAAGCCTTGCTGA | 1521 | 46.35 | MAERQCFETDQLGSSKVTAGLEDDEEEMEDSEDESEVELEDGGALNELQPVESRIDSSVTEAAARESPSETLTAPSANHSSENGLPVDSAAQSLEEAELKQSPSSCHEPLAVEATQTDKVQEQSQLQLSIYKGPDPEQSPTSVTQSISSSASPSLSKHKLSPKKVQKECKPEPSQKNSSNHKTASSVPNVRTPASDGYNWRKYGQKQVKSPKGSRSYYKCTYSECCAKKIECCDHSGHRTEIVYRSQHSHDPPRMISNPKERQLVPYVEPVVKQIITEHSRRVINDSDPPTPSKEPSRETASVLVRKRQYSSDSDGNDEFKIKDENDGEPETKQKVKKSSAGYSGTPLKPGKKPKFVVHAAGDVGISGDGYRWRKYGQKMVKGSPHPRNYYRCTSAGCPVRKHIESAVENPYAVIITYKGVHDHDMPVPKKRHSPPSAPHIAAAAPASMSNTQPKTTDLTENQISSTQWSVDAEGELTGEALELGGEKAMESARTLLSIGFEIKPC | 506 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 2149622 | 2153640 | - | Carg09996-RA | Car10g00431 | 155333 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car10g00431 | 506 | Coils | Coil | 21 | 41 | - | - | |
Car10g00431 | 506 | MobiDBLite | consensus disorder prediction | 161 | 175 | - | - | |
Car10g00431 | 506 | MobiDBLite | consensus disorder prediction | 286 | 310 | - | - | |
Car10g00431 | 506 | MobiDBLite | consensus disorder prediction | 108 | 159 | - | - | |
Car10g00431 | 506 | MobiDBLite | consensus disorder prediction | 1 | 215 | - | - | |
Car10g00431 | 506 | ProSiteProfiles | WRKY domain profile. | 362 | 427 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Car10g00431 | 506 | MobiDBLite | consensus disorder prediction | 279 | 354 | - | - | |
Car10g00431 | 506 | MobiDBLite | consensus disorder prediction | 176 | 193 | - | - | |
Car10g00431 | 506 | MobiDBLite | consensus disorder prediction | 51 | 88 | - | - | |
Car10g00431 | 506 | Pfam | WRKY DNA -binding domain | 369 | 424 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Car10g00431 | 506 | Pfam | WRKY DNA -binding domain | 196 | 250 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Car10g00431 | 506 | MobiDBLite | consensus disorder prediction | 311 | 336 | - | - | |
Car10g00431 | 506 | MobiDBLite | consensus disorder prediction | 22 | 41 | - | - | |
Car10g00431 | 506 | ProSiteProfiles | WRKY domain profile. | 195 | 253 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car10g00431 | Car-Chr10:2149622 | Car14g00022 | Car-Chr14:149155 | 7.72E-16 | dispersed | |
Car10g00431 | Car-Chr10:2149622 | Car02g00856 | Car-Chr2:6165402 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
4171 | PF03106 | WRKY | 1.60E-23 | CL0274 | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car10g00431 | - | - | bhj:120071353 | 748.043 |