Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car10g00432 | ATGTCGGACGAGGAGCACCACTTTGACTCTAGGGCCAACGCCAGAGAGCCCGAGACTTACCCTGAGGAAGCTAGAACCTGGCTACATCAAATCTCACACAAAGCTATCAACATCAAAGATCTCCTCAAAGATGTCGTTGAAGTTTCTACTTCAAAACCTGGAAAGCATGGACATGCAAAGTGCCACTTTGTGGCAATTGACATATTCAATGGGAAGAGACTTGAAGTATTTGTTCCTTCTTCTCAGAAATGCGATGTTCCCTATGTTTATCACACCGACTATCATCTGATTGATATATGCGAGGATGGTTTTGATGGTCTGACGCTCCCCAAGGATGAAAATCTGCGTAGGCAGCTTAAAGAGGGGTTCGCTCATAGAAAAGATCTTGTAGTAACTGTCATGTCTGCAATGGGAGAGGAGCAGATCTGTGCTCTCAAGGACATCGGTCCTAGAAAGGTTGTTATTAAGGTCATTGAAGCTCATCACTATCGAGTGGCTGTTGTTTCCTTGAAAAAGGGCGAGGGCTTGGCCCGACCGATATGA | 543 | 45.49 | MSDEEHHFDSRANAREPETYPEEARTWLHQISHKAINIKDLLKDVVEVSTSKPGKHGHAKCHFVAIDIFNGKRLEVFVPSSQKCDVPYVYHTDYHLIDICEDGFDGLTLPKDENLRRQLKEGFAHRKDLVVTVMSAMGEEQICALKDIGPRKVVIKVIEAHHYRVAVVSLKKGEGLARPI | 180 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 2154764 | 2158543 | - | Carg09995-RA | Car10g00432 | 155334 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car10g00432 | 180 | Pfam | Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold | 89 | 146 | IPR020189 | GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905 | |
Car10g00432 | 180 | ProSitePatterns | Eukaryotic initiation factor 5A hypusine signature. | 53 | 60 | IPR019769 | GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905 | |
Car10g00432 | 180 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car10g00432 | Car-Chr10:2154764 | Car18g01034 | Car-Chr18:10675800 | 1.21E-58 | dispersed | |
Car01g01279 | Car-Chr1:11589971 | Car10g00432 | Car-Chr10:2154764 | 2.98E-62 | wgd | |
Car10g00432 | Car-Chr10:2154764 | Car02g00855 | Car-Chr2:6161130 | 3.76E-65 | wgd | |
Car10g00432 | Car-Chr10:2154764 | Car05g00295 | Car-Chr5:1630760 | 7.60E-59 | wgd | |
Car10g00432 | Car-Chr10:2154764 | Car09g00361 | Car-Chr9:1964282 | 3.35E-62 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car10g00432 | K03263 | - | tcc:18587850 | 193.356 |