Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00436 ATGGCGTTGCTGCGCAAATTGTTCTTCCGGAAGCCGCCCGATGGCCTTCTCGAGATCTGTGAAAGAGTTTACGTTTTTGATTGCTGTTTTACCACAGATTCGTGGAAGGAGAAGAATTATGAAGCTTACTTATGTGGAATAGTTGCTCAACTCAGAGAGCATTTAGCAGATGCATCGTTCTTGGTATTCAATTTTAGGAGATTAGAGATGCAAAGTCAGATGGGCGATATCTTATCGAAGTATGATATGACCATAATGGACTACCCTCAGCAGTACGAGGGTTGTCCAGTTCTGACAATGGAAGTGCTTCACCATTTTCTAAGATCATGTGAGAGTTGGCTTTCCCTGGGACAAAATAACGTTTTGCTAATGCACTGTGAGCGTGGTGGTTGGCCAGTTTTAGCTTTCATGCTTTCGGCTCTCTTGATTTTTAGGAAACAATATAGTGGGGAGCAAAGAACATTGGACATGGTTTACAGGCAGGCACCGCGTGAGCTTTTACATGTTTTGTCTCCTATGAATCCAGTTCCTTCTCAATTAAGATATCTTCAATACATTGCAAGGAGGAATGTAGCCTTAGAATGGCCACCTATGGACAGAGCTCTCACTTTGGATTGTATCATTTTGAGATTTATTCCAAATGTTGATGGAGAGGGTGGTTGCCGTCCAATATTTCGAATATATGGACAAGATCCTCTGCTCGTCAGTGATCGAGCTCCTAAAGTTCTGTATTCAACTCCAAAAAGAAGTAAAAATGTCCGTTCTTACAAACAGGTAGAATCAGAACTGGTTAAGATTGATATTAATTGCCATATTCAAGGAGATGTTGTTCTTGAGTGCATCAGCTTGCATGACGACATGGAATCTGAAGAGATGATGTTCAGAGCAATGTTTAATACTGCTTTTATTCGCTCTAATATCTTAATTGTCAACCGTGAAGAGATCGACACTTTATGGAATGCTAAAGATAAATTTCCAAAAGAGTTTCGAGCAGAGATTCTTTTCTCTGAGATGGATGCTGGAACTTCTACTGTTCCAAATGATGTACTTTGCATTGAGGAGGATGGTCTCCCCATTGAAGCATTTGCTAAAGTACAAGAGATCTTTAGTCATGTGGATTGGTTAGATCCCAAAGCAGATGTTGCCCTTAATATGCTTCATCAGATGAATGCCTTAAACATAGCCCAAGAAAAGACAGACAATAATTCTCTTTGGAGTACACAATTTAGTTCTTTACTTCAGTGTACAAGTCCCAGAAAACTTCCGCAGAAGTTCACATTGGAGAACAAACTTTTCCTAGAGAAGGAAGAGTCTGTTCCAACATCTAAGTTTTCTCCGGATGCTGCTAAAACTGAACAGAACAATGAACCTGATTCAATATTCCAACAGGTACCTCGATCTTCAGGGTCTTTCCCACTTAACTATGACATTTTGCAAGTTTCGCGGAATTCAGAGAGAAGCAATAGGACCTCACACAGTGCTTCGGTTGGAAGCCACTCATTTCTTGATTCTGAAGGAGAAACAGAGGTTTCTCATCTGAAAACTGCATCTTCATCTTTTCTGAATGCAGCATTGGCTGTTTCTCTTGCGCCTGAATCTCTTCGCACTAAAAGTTTCCTTACAGGGACAACCATGCCACCACCTCCTCCTCTCCCCCAACTTTCCATGGATATTTCTGTTGCTAATTCTGTAGCTTATCCTCCCCCTCCAACTGCATCAGCACTTCCGTCTAATAATTTATCAACTCTAGGACCAGATAAATCTTCTCTCACCGAGGAAAGAAAAATCTATTCAAAGGATCAAAGTCAATTATCAACCATTGGCCCTCCCCTGTCTGTAACCTCAGCAATTGCATCCTTAGTGCCTCAACCACCACCACCACCACCTCCTCTTTGTACATCCACTGTAAATCATACAATTTCATCTCCAGTTCCTTTGCCACCACCACCTCCGCCTCCACCTCTTCCTATGACGTCTAAACAGGATGAAAGTACTTCAACATCTCCATTTGTTCCTCCTCCACCACCACCACCTCTTCTTATGACATCCATGCAGTTTGGAAGTACTTCAACATCTTCTTCTGTTCCACCTCCGCCCCCACCTCTTCCGTTTAGACCGGTTGAATATACTTCAACATCTTCTTCTGTTCCACCTCCGCCCCCACCTCTTCCGTTTAGACCGGTTGAATATACTTCAACATCTCCATCTGTTCCCCCTCCTCCACCACCGCCAACTTCCACCACAGGCTCCTCTTCAGCTGTTCCTTCTGCTCCCCCTCCTCCTACCCTTTCTGGGAGAGGGACTTCAAAATCTGGTGAACTATGTTCTGATTCTCTTCTCGAAAATGGTTTGTCTAGGTGTCCTCCGCCACCAAATAGTTATCCATTAGGTATAAAGGGACGGAGTTTGTCACGCACTATAAATTCAAGATCACATATAACCAAGAAACTTAAGCCATTGCATTGGTTAAAGTTATCTAAAGCAGTGCAAGGAAGCTTATGGGCTGAAACTCAAAAAACTGGTGAAGTTTCCAGGGCACCAGAGATTGACATGTCAGAGCTTGAAAGTCTTTTCTCAGCGGCAGTTCCTGCTCCTGATCTGCTCAAGAAGTCAGGTGGGCCTGGTTCAGTCGGGAATAAACCTGAGAAAGTACAACTGATTGATCATAGGCGAGCTTACAATTGTGAAATCATGCTTTCAAAGGTTAAGGTGCCTTTGCAAGATTTAATGAGTTCTGTGCTTGACCTTGAAGATGCAGCGCTGGATATCGATCAGGTTGAGAATCTTATTAAGTTTTGTCCGACAAAGGAGGAAATGGATTTACTCAAGGGCTACACCGGAGAAAAGGAGAAGCTTGGAAAATGTGAACAGTTCTTCTTAGAGTTGATGCAAGTACCTCGTGTTGAATGTAAACTTCGAGTTTTCTCATTCAAGATGCAGTTCAGCTGTCAGGTAACTGACCTCAAAAAAAGCTTGAACTTTGTTAACTCTGCTGCAGAAGAGATAAAAAGTTCAGTGAAGTTGAAGAGAGTCATGCAAACAATACTATCTCTAGGAAATGCTTTAAACCAGGGAACAGCGAGGGGCTCTGCTATAGGATTTAGGCTGGATAGCCTTCTTAAACTGACAGAAACTCGTGCACGAAACAACAAGATGACTCTAATGCATTATCTTTGCAAGATACTTGCTGACAAACTGCCAGAAGTTTTGGATTTTTCTAATGATCTTGCAAGCTTGGAGCCTGCATCAAAGGTACAATTGAAGATTTTGGCAGAGGAGATGCAAGCAATTAGCAAAGGGTTGGAGAAAATAGTTCAAGAATTGTCTACATCTGAAAATGATGGCCCTATATCCAATAATTTCCGAATGGTTTTAAAGGAGTTCCTCCGTTTTGCTGAAGCTGAAGTCAGAACTCTGGCTTCACTATACTCTAGCGTGGTTATTGCTTATCTGGAACTTGATACTTTTCAGGGTAGAAATGTAGATTCTTTGATTCTTTATTTTGGAGAAGATCCAGCTCGCTGCCCCTTTGAACAAGTTATGTCAACCTTATGCAACTTTGTGAGTATGTTTAACCGAGCCCACGAGGAAAACTGCAAGCAGATAGAGCTTGAATTGAAGAAAGCAACTGAAAAGGAAAAATCAAAGACGGGGCACGTGCACAAAAAGACGAGGACGAAGAAGTTATCACGCTCCCAGGTCGAGATTGGCAATCAACCCAGGCAGATCAAGCTTCATCCTGTTGCTGAATGTGCTGAGCAGGCTGGCTGCTTGTATCAAAACTGA 3786 42.39 MALLRKLFFRKPPDGLLEICERVYVFDCCFTTDSWKEKNYEAYLCGIVAQLREHLADASFLVFNFRRLEMQSQMGDILSKYDMTIMDYPQQYEGCPVLTMEVLHHFLRSCESWLSLGQNNVLLMHCERGGWPVLAFMLSALLIFRKQYSGEQRTLDMVYRQAPRELLHVLSPMNPVPSQLRYLQYIARRNVALEWPPMDRALTLDCIILRFIPNVDGEGGCRPIFRIYGQDPLLVSDRAPKVLYSTPKRSKNVRSYKQVESELVKIDINCHIQGDVVLECISLHDDMESEEMMFRAMFNTAFIRSNILIVNREEIDTLWNAKDKFPKEFRAEILFSEMDAGTSTVPNDVLCIEEDGLPIEAFAKVQEIFSHVDWLDPKADVALNMLHQMNALNIAQEKTDNNSLWSTQFSSLLQCTSPRKLPQKFTLENKLFLEKEESVPTSKFSPDAAKTEQNNEPDSIFQQVPRSSGSFPLNYDILQVSRNSERSNRTSHSASVGSHSFLDSEGETEVSHLKTASSSFLNAALAVSLAPESLRTKSFLTGTTMPPPPPLPQLSMDISVANSVAYPPPPTASALPSNNLSTLGPDKSSLTEERKIYSKDQSQLSTIGPPLSVTSAIASLVPQPPPPPPPLCTSTVNHTISSPVPLPPPPPPPPLPMTSKQDESTSTSPFVPPPPPPPLLMTSMQFGSTSTSSSVPPPPPPLPFRPVEYTSTSSSVPPPPPPLPFRPVEYTSTSPSVPPPPPPPTSTTGSSSAVPSAPPPPTLSGRGTSKSGELCSDSLLENGLSRCPPPPNSYPLGIKGRSLSRTINSRSHITKKLKPLHWLKLSKAVQGSLWAETQKTGEVSRAPEIDMSELESLFSAAVPAPDLLKKSGGPGSVGNKPEKVQLIDHRRAYNCEIMLSKVKVPLQDLMSSVLDLEDAALDIDQVENLIKFCPTKEEMDLLKGYTGEKEKLGKCEQFFLELMQVPRVECKLRVFSFKMQFSCQVTDLKKSLNFVNSAAEEIKSSVKLKRVMQTILSLGNALNQGTARGSAIGFRLDSLLKLTETRARNNKMTLMHYLCKILADKLPEVLDFSNDLASLEPASKVQLKILAEEMQAISKGLEKIVQELSTSENDGPISNNFRMVLKEFLRFAEAEVRTLASLYSSVVIAYLELDTFQGRNVDSLILYFGEDPARCPFEQVMSTLCNFVSMFNRAHEENCKQIELELKKATEKEKSKTGHVHKKTRTKKLSRSQVEIGNQPRQIKLHPVAECAEQAGCLYQN 1261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2176912 2187179 + Carg09990-RA Car10g00436 155338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00436 1261 MobiDBLite consensus disorder prediction 713 762 - -
Car10g00436 1261 Pfam C2 domain of PTEN tumour-suppressor protein 199 337 IPR014020 -
Car10g00436 1261 Pfam Formin Homology 2 Domain 814 1192 IPR015425 -
Car10g00436 1261 MobiDBLite consensus disorder prediction 600 619 - -
Car10g00436 1261 MobiDBLite consensus disorder prediction 482 503 - -
Car10g00436 1261 ProSiteProfiles C2 tensin-type domain profile. 199 338 IPR014020 -
Car10g00436 1261 MobiDBLite consensus disorder prediction 569 799 - -
Car10g00436 1261 MobiDBLite consensus disorder prediction 444 468 - -
Car10g00436 1261 Coils Coil 1192 1212 - -
Car10g00436 1261 MobiDBLite consensus disorder prediction 763 778 - -
Car10g00436 1261 MobiDBLite consensus disorder prediction 1210 1233 - -
Car10g00436 1261 MobiDBLite consensus disorder prediction 438 468 - -
Car10g00436 1261 MobiDBLite consensus disorder prediction 642 658 - -
Car10g00436 1261 ProSiteProfiles Formin homology-2 (FH2) domain profile. 807 1217 IPR015425 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00436 Car-Chr10:2176912 Car19g00151 Car-Chr19:1331078 2.51E-143 dispersed
Car01g01277 Car-Chr1:11572988 Car10g00436 Car-Chr10:2176912 1.40E-180 wgd
Car10g00436 Car-Chr10:2176912 Car02g00851 Car-Chr2:6133121 0 wgd
Car10g00436 Car-Chr10:2176912 Car09g00362 Car-Chr9:1972665 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00436 - - cmax:111485750 2162.5