Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00447 ATGACCGTGGAGGGTCATTCAGTTGATTCAGCCGGCGATGGTGGCGCCGCCGATCATTTTCCTGTTGGGATGCGGGTTCTGGCTGTCGATGATGATCCCATTTGTCTTAAAGTGCTCGAGCATCTCCTTCGGAAATGCCAATATCATGTCACCACGACGAAGAGGTCCATTGAGGCTTTGAAGATGTTGAGAGAAAATAGAAACAAAGTGGATTTGGTTATCAGTGATGTGAACATGCCTGATATGGATGGGTTCAAGCTTCTTGAGTTGGTGGGGCTTGAGATGGACTTACCTGTGATCACACATAGTGATACTGAGCTTGTGATGAAGGGGATTGCGCACGGTGCGTGCGACTATCTGTTGAAACCAGTTCGAATCGAGGAGTTGAAGAACATTTGGCAGCATGTGATTCGGAGAAAGAAGCTCGAACCGAAGGCAAGAAACAAGTTCCCTAATCAAGATAACATTGGAAATGGAGGCAGTGAAGGTGAACAAGGTTTCTCATCAACCAGTAATGCAGACAATGCAAAACTCAACAGGAAACGAAAGGAACAAGACGATGATGAGGATGAAGAAGGAAAAGAGAACGAGGTTGATATCGACGACCCTTCGAACCTTAAGAGGCCTAGGGTAGTATGGTCGGTTGAGTTGCACCGGAAGTTCGTTTCGGCAGTTAATCAGTTGGGTCTTGAAAGTAAGCTTTACCTGAAAAGAATCAGCAATGTGGCATCTCAACAAGCTAACATGGCTGCAACATTTGGGAGTAAAGAAGGCACTTACATGCGCATAGGTTCATATGATGGCTATGGAGATATGCATGGCTTTGCAGGATCAGGGCGGCTTCCAAGCTCTTCATTATCTTATTATTCACCTGTTGGAATGAGCCTGATCCAACAAAGCTCCCATAATTTGAACTGTGCTATCAGTAATCTTGGGAGCTTCCAACCAGCTATTATGTTGCCTCCACACCAAGCTACTAATCTATTGCAAGGGATTCCGACGTCACTCGAGCTCGGCCATTTGCAGCACAGCAAGTCCACCACTTCCATTGGAGAAGCTTTTGACATAGACTTCGGCTGTTCGAGTTTTTTGGATCCTGATCCTTCTAATGGAAACTGGCAGGGAGCAGCACAATTGTTGAGATTCTCAGCAACTTTGAACCCGAATGAGGAGTATCCCATTGATCAAATGCATGCAATGAACTCGAGCATTTCCTCCGCCCCCTCAACGAACAGGAACATCTCGGTTGTTGGATCAGTTTCAGCTCCCTTGCTGGATTCAAGAGACCTGCAATGCCAGGCAGGGGTAGGGGTGGTTGACAGTATGCCAAAGCAGAGTTGGGAAGAGCACGAACACGAATACGCTCGATCCCCCTTAAGCCAGCGTTTCAATCAGAATAGTCTAGTTTGTGAGAGAAAGGTCGGTTCGTCTTTGATAGTCCCATCAAATGATGCTCAACTATCCTTCCCTCAGCACAGTGTGGTTGAAAAACTGGATCCTAACACAAAGACGAATGCGGATAGAAACTTACACGATGGATCGATTCAAGGAAGTTTCGAGTCCTTGGATGATATAATGAACGCGATGATCAAACAGGTCGAGTTTCATGGGCCATTTGGTTGTAAAATGCAGTAG 1635 46.18 MTVEGHSVDSAGDGGAADHFPVGMRVLAVDDDPICLKVLEHLLRKCQYHVTTTKRSIEALKMLRENRNKVDLVISDVNMPDMDGFKLLELVGLEMDLPVITHSDTELVMKGIAHGACDYLLKPVRIEELKNIWQHVIRRKKLEPKARNKFPNQDNIGNGGSEGEQGFSSTSNADNAKLNRKRKEQDDDEDEEGKENEVDIDDPSNLKRPRVVWSVELHRKFVSAVNQLGLESKLYLKRISNVASQQANMAATFGSKEGTYMRIGSYDGYGDMHGFAGSGRLPSSSLSYYSPVGMSLIQQSSHNLNCAISNLGSFQPAIMLPPHQATNLLQGIPTSLELGHLQHSKSTTSIGEAFDIDFGCSSFLDPDPSNGNWQGAAQLLRFSATLNPNEEYPIDQMHAMNSSISSAPSTNRNISVVGSVSAPLLDSRDLQCQAGVGVVDSMPKQSWEEHEHEYARSPLSQRFNQNSLVCERKVGSSLIVPSNDAQLSFPQHSVVEKLDPNTKTNADRNLHDGSIQGSFESLDDIMNAMIKQVEFHGPFGCKMQ 544
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2251152 2253974 - Carg09979-RA Car10g00447 155349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00447 544 Pfam Response regulator receiver domain 26 131 IPR001789 GO:0000160
Car10g00447 544 MobiDBLite consensus disorder prediction 144 203 - -
Car10g00447 544 MobiDBLite consensus disorder prediction 151 175 - -
Car10g00447 544 ProSiteProfiles Response regulatory domain profile. 25 137 IPR001789 GO:0000160
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00843 Car-Chr2:6081581 Car10g00447 Car-Chr10:2251152 0 dispersed
Car10g00447 Car-Chr10:2251152 Car14g01419 Car-Chr14:11919856 7.30E-77 dispersed
Car01g01266 Car-Chr1:11487480 Car10g00447 Car-Chr10:2251152 1.02E-12 wgd
Car10g00447 Car-Chr10:2251152 Car11g00369 Car-Chr11:2025765 1.57E-36 wgd
Car10g00447 Car-Chr10:2251152 Car12g01145 Car-Chr12:11098431 1.65E-104 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4174 PF00072 Response_reg 3.90E-20 CL0304 Car TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00447 K14491 - cmos:111429974 984.941