Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00450 ATGAACAAAATGCTACGTGCTCATTGCCACATCAGCCAACCTGTTACTGGAACAGCCCGTAGGGTCTGGGAAGCCACAGAAGGTATCAACCAACTCTGCTCGGCACTGGTTGTAACCACTCCAGCTCTGCAGCCTGCCGGAGAAAGAAGGGATATTCCAAGTGTTTTTGGAGATTTTCTTCTTCGTTTTGGTTGTTTTTGGTCAGCTATGGGCGATATTTCGTTGGAAGATGTCAAGAATGAGAACGTTGATCTAGAACGGATTCCTGTGGAGGAAGTTTTTGAGAAACTAAAGTGCACTAAAGAAGGATTGAGCACAGCAGAAGGAGAAAAGAGACTCCAAATTTTTGGTCCCAACAAGCTTGAAGAGAAAAAAGAGAGCAAGGTTTTGAAGTTCTTGGGGTTTATGTGGAATCCTCTATCATGGGTTATGGAATCTGCGGCAATCATGGCCATTGCCCTGGCTAATGGAGGGGGGAAGCCACCGGATTGGCAAGATTTTGTTGGGATTATTGTGTTGTTGATCATTAACTCTACCATTAGTTTCATTGAAGAGAACAATGCTGGAAATGCAGCTGCTGCTCTCATGGCTGGTCTGGCCCCCAAAACCAAGTCAAAAGTGACTCAAGTGTCGAACGAAGGGTGTGCTTTGTTCGAGGGCTCTAGAGAAGGAGTCGAGCCTCAATTAAGGGTTCTAAGAGATGGAAAGTGGAAAGAAGAGGAGGCAGCAATTCTGGTTCCCGGGGATGTGATTAGCGTTAAATTAGGAGATATTATCCCGGCCGATGCACGTCTCTTAGAAGGCGATCCTCTCAAGATCGACCAGTCTGCTCTTACGGGTGAATCTTTGCCTGTCACCAAGAATCCAGGTGATGGAGTGTTCTCTGGCTCCACCTGCAAGCAAGGTGAGATTGAGGCCGTTGTTATTGCTACTGGAGTGCATACCTTTTTCGGAAAGGCAGCTCATCTTGTGGACAGCACCAACCAAGTTGGTCATTTCCAAAAGGTGTTGACGGCCATCGGAAACTTCTGTATATGCTCGATCGCAGTCGGGATGGTCATTGAGATTCTAGTAATGTTTGCTATCCAGCACAGAGCATACAGAGAGGGCATTGACAACTTGTTGGTGCTTCTCATTGGAGGCATTCCCATCGCAATGCCAACAGTTCTTTCAGTAACCATGGCCATCGGATCGCATCGCCTTTCGCAGCAAGGTGCCATTACCAAGAGGATGACAGCCATTGAAGAGATGGCTGGGATGGATGTACTGTGCAGTGACAAGACAGGAACTCTCACCCTCAACAAGCTCACAGTAGACAAGTCCCTGATCGAGGTGTTTGTACCAAACATGGACAAGGACGCTGTCATGCTGTTTGCTGCAAGAGCGTCGAGAGTCGAAATCAAGATCAATGCCTGCATTGACGCATCCTTGATGCTGCATTTAGTGATGGGAGCAAGAGCAGGAATAACTGAGGTGCATTTCTTGCCGTTTAACCCGGTCGATAAACGTACTGCCATTACCTACATCGACACAGATGGTAACTGGCACAGAAGCAGCAAGGGCGCTCCTGAACAGATCATTGACCTTTGTGACCTTAGAGGTGAAGTAAGGCAGAAAGCTCATACCATTATCGATAACTACGCTAATCGCGGTCTTCGTTCGTTGGCCGTTTGTCGACAGACTGTTAAAGACAAGGACAAGGAAAGTGCTGGAGAACCATGGGAATTTGTTGGTCTCTTGCCTCTATTTGATCCTCCAAGGCATGACAGTGCAGAAACCATTCGCCGAGCTCTAGAACTTGGTGTTAATGTTAAGATGATCACTGGCGACCAACTTGCAATAGGCAAAGAAACCGGTCGGAGGCTCGGCATGGGCACGAACATGTATCCGTCGTCGTCTTTGCTCGGGCAAAGCATGGATGAGTCAATTGCTTCTATTCCTGTTGATGAACTCATTGAGAAGGCTGATGGGTTTGCAGGAGTCTTCCCAGAACACAAGTATGAGATTGTTAAGAGACTTCAGGAGAGGAAACATATTTGTGGCATGACAGGAGATGGTGTCAATGATGCTCCAGCTCTCAAGAGGGCCGACATCGGTATCGCTGTGGCTGATGCAACCGACGCAGCACGAAGCGCATCAGACATTGTCTTGACCGAGCCAGGACTAAGTGTGATTGTGAGTGCTGTGTTAACCAGTAGAGCCATCTTTCAAAGAATGAAAAACTACACTATCTATGCAGTTTCCATTACAATACGTATTGTGTTGGGATTCATGCTTGTTGCTCTCATCTGGAAGTTTGATTTCTCGCCTTTTATGGTCCTTATCATTGCCATCCTAAACGATGGAACCATCATGACCATTTCAAAGGATAGGGTGAAGCCATCACCTGTGCCTGACTCATGGAGACTCAAAGAGATTTTTGCTACTGGTGTTGTCCTTGGAACATACATGGCCTTCGCGACCGTGTTTTTCTTCTGGCTCGCCAACGAAACCGTCTTCTTCCCGAAAACATTTGGCGTAAAGCCACTCAGAGATCTTGCTGAGATGAACTCTGCTCTCTATCTTCAAGTGAGCATCATCAGTCAAGCTCTCATCTTTGTCACCAGGTCAAGAAGTTGGTCCTTTGTTGAATGCCCTGGTTTCTTGCTAGTTATTGCCTTCCTTGCAGCACAGTTGGCCACCTCCTTTCGGGACCCAGCATCCTTGCTAGCACACCGCCTCGTGTCCACCCCCCTTCAAGGCTCAGCCTCCTCGTTGGTTGCCACTCTAATTGCTGTATACTCCGAATGGGACTTTGCAAGGATCAAAGGCATTGGGTGGGGATGGGCAGGAGCCATCTGGTTATTCAGTATTGTCACTTACTTCCCACTTGATGTCCTCAAATTTGCAATCCGTTATGGACTCAGCGGCAAGGCCTGGGACAATGTGCTCGAGAATAAGACTGCGTTTACGACGAAGAAGGATTACGGAAAAGGCGAAAGAGAGGCACAATGGGCAACAGCCCAACGTACAAGGCATGGCCTGCAGCCACCAGAAACCATATTTCGTGAAAAGAGCAGCTACGAGGAACTTTCAGCGATAGCAGAGCAAGCCAAGAAGAGAGCTGAAATTGCCAGGCTGAGGGAACTCCACACTTTGAAGGGCCATGTGGAGTCAGTGGTGAAGTTGAAGGGGTTGGACATTGACACTATCCAACAACACTACACTGTTTGA 3213 47.74 MNKMLRAHCHISQPVTGTARRVWEATEGINQLCSALVVTTPALQPAGERRDIPSVFGDFLLRFGCFWSAMGDISLEDVKNENVDLERIPVEEVFEKLKCTKEGLSTAEGEKRLQIFGPNKLEEKKESKVLKFLGFMWNPLSWVMESAAIMAIALANGGGKPPDWQDFVGIIVLLIINSTISFIEENNAGNAAAALMAGLAPKTKSKVTQVSNEGCALFEGSREGVEPQLRVLRDGKWKEEEAAILVPGDVISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPGDGVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMVIEILVMFAIQHRAYREGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSLIEVFVPNMDKDAVMLFAARASRVEIKINACIDASLMLHLVMGARAGITEVHFLPFNPVDKRTAITYIDTDGNWHRSSKGAPEQIIDLCDLRGEVRQKAHTIIDNYANRGLRSLAVCRQTVKDKDKESAGEPWEFVGLLPLFDPPRHDSAETIRRALELGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSMDESIASIPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLVALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWRLKEIFATGVVLGTYMAFATVFFFWLANETVFFPKTFGVKPLRDLAEMNSALYLQVSIISQALIFVTRSRSWSFVECPGFLLVIAFLAAQLATSFRDPASLLAHRLVSTPLQGSASSLVATLIAVYSEWDFARIKGIGWGWAGAIWLFSIVTYFPLDVLKFAIRYGLSGKAWDNVLENKTAFTTKKDYGKGEREAQWATAQRTRHGLQPPETIFREKSSYEELSAIAEQAKKRAEIARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 1070
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2261931 2267964 + Carg09976-RA Car10g00450 155352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00450 1070 Pfam haloacid dehalogenase-like hydrolase 420 697 - -
Car10g00450 1070 Pfam Cation transporter/ATPase, N-terminus 88 150 IPR004014 -
Car10g00450 1070 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Car10g00450 1070 Coils Coil 1021 1041 - -
Car10g00450 1070 Pfam E1-E2 ATPase 226 403 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00450 Car11g00342 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00450 Car-Chr10:2261931 Car12g00275 Car-Chr12:1821076 0 dispersed
Car01g00149 Car-Chr1:761718 Car10g00450 Car-Chr10:2261931 0 wgd
Car10g00450 Car-Chr10:2261931 Car02g00839 Car-Chr2:6060705 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00450 K01535 - csv:101214655 1670.21