Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00456 ATGGCATTTGATCAGAACGCGATTCCCACTGGCTTGCGGCCTTTAAATGTAGCTAGAACTTTAGTTGAAGATCCCCATTTAACGCCGGTTGCTACTGCTGGGCGTAATCCCCAATGGGTTGCCCCCAAGCTTCCCTGCGACATTGCTAACACAGACTCTGTACCCGTTCCTTGTAAGGGAAATGTCTCCGATATGGGATTTATTGAGGGAGGATATGGAAATGTGGTTACTGGCGTTACGGCTTGGTGCCCTCGAATGCCTCCTCCTCTCACGCACACTGCAATGGTTCCTGCGGCAGGGTTTGGTTACTGCTCGAACCTGAATGCCTGGGGCAATCGTGGTGGTGCCAATGCTATTGAGTTTGCTAGCAGTTGCATGACAGTTGGGATTAATCATAGTACAAATTTGAGTCATCGAGATGGGGGAGGTGGCATGGAATTTTCGAGCAATAATATCGTAATGGGGTCTGGGGATAGTACCAATTTATGCAATAAGGTTGCTGCCAACGGTGATCATATCAGTAGTGATAGCACCTCTGGATTTAGCTCCCCCTTGGGGAATTCAGCTGGTGGGAATGCGGTTGATCAAGTGAGAGAGGAGGGGGGAAACAGTTCCGTTCCGAAAAAGAAAGTTAAGTTTATGTGCAGTTTCGGTGGCAAGATTTTTCCAAGACCGAGTGATGGTATGTTGAGATATATTGGAGGTCAAACAAGGATTATAAGTGTTAGAAGAGATGTGACTTTCAATGAGTTTGTGCGAAAGATGGTTGATACCTGTGGGCAGGCTGTGGTTATAAAGTATCAGCTCCCTGATGAGGATCTTGATGCTTTAGTATCTGTTTCATGCCCTGATGATCTTGATAATATGATGGACGAGTATGAGAAGCTGGTTGAGAGGTCTTCAGATGGATCTGCTAAATTGAGGATGTTTTTGTTCTCTGCTTCAGAACTTGACTCTGCAGGTATGGTGCAATTTGGCGACGTACACGATAGTGGGCAGAGATATGTTGAAACAGTGAATACGATATTTGATGGCGTAGGTGGCCGTATTACAAGGAAAGAGAGCTTTACAAGTGCTACCTCAACTCAGAATTCTGACTTAAGTGCGACCGAGGCAATGGATATCTCATATAACGATCTAGGGGTTGTGGGTGAGCCTCCATCCACAACATTGTCCGTACCTGAAGGAAATTTAGGTACTTCAGTTGCTATTGGCCCTGGATTAGTGAAGGTAGATACTGTCTCTGCAGTTTTTGTAGATGCCTCGGCTGTTCCATCAAGTATTCCTGTGATTAACTCTGTTCCTCCTGAAAGTTCTTCCCAGCCAGAGGCGGAGTTAGGAAGGTCGGTGCCTGCTACTCTGATGCAACAGCAACCAGATATTGGCTTTCCTCCACCTGTGCCTCAATTGCAGCCTACTGTTGATCCTCGCCAAGCAGCATGTGTGGACTTTATACAATTTCGTCCACAGCTAGGCTTTTCAAATTCTCATCATCTAGGGACATCTGGGTCTATGTTTATACAACAGCCAAATACTCTTGGAATAACCCCTCATCAGTTTGTCCCTGCAGTTCACATGAGGATGGCTCCCTCTTCTAACCTCAGTATTATGCCTAATACCTATCAATCGTTGGTGCAATATCCACAATCCCAACCGGAATATTTTTCCAACGCAAGCACATCTGGTCCAAGGTTTGTCCAGCTATCTGCAGAACAAGGCTACAACTCACGCCAGATTCCAGCTCCTCCAGTATCAGTGGAGGTTGGATATGGTTTACATCATGTACCATGGTCTGATCAGACAGTTATATCTGATGAATTGGTATCCCAACATCAGGTAACTTTTGCTGAGAAAATCAAGAGGTTGGATGACTGTTACCTCTGCCAGAAAGCAGTGCCACATGCTCATTCCAATTCAACGTTGCAGGATAAAAGAGAAAATTTGACAAACCCTGTATCTGATTCAAAATTTTCGTATTACAGTCACCACCCTGAAGATCATTTAGCAGCCCATCCAATGAAAAATATTACAGAAACTGGAGCTTTGGGGCAACAAACTATTGAACATGGTGTTGGAATGCAAACCAGGATATTTAATCCCATGGATCCAGAAGTTGAAAAATCTTCAGTGGAGGCTATTGGCTTCCCACATCATATGGGCAGTCAACATGAGAACGACAACACACTAAAAGATCGACCTAATATTGATCATAGTAAGATCTCAGCTCTGCAGGGTGCTCTTGGGAGGCAAGGTGATTTTCCGTCACCCCATGTTGCTGTTGTAGAACAGATTCCTCAGCCTGGTGAAGTTGATACTCTCCAGCACCAGTATGCAGCTGTAGAGAATCGGTTCCATCCAAATTTAGACGTGGATAAACACAATATTTGCTTTGGAGGTGCTCCTATTCTTGCTTCAGAGTACAGCAGTCATGAAAATCCAAAGGTTTATTCTAATAGTCCTCATGGCATTATTCCAAATCAAAATGCTACCCACACTGGAATTTGGTACGACCATCTCAGACCAATTGTTGGAAATTTGGAAAGTTTAAGTATATGCCCAACTGATATTTGTCCTAATCTGGATCACTGCAAATCACCCACTGAAAGAACTAGGAAGGAGGACAATTTTGGTAGCTATTCACAACCAGTCTCTGAGATAGAAGTTCTACTTGATAACAACTCTGTAAAGCCAATAGTGGTTCTCGACACAAATCATGTGAAATCAACTACTTTTGCTTGCTCTTCATCAGAGGTTCCCTATTTGATGAGTGAACGACCTGTTGAGTCCAGTGAAGTGGCACAACCTCCTGTCGGGGGCTATCCTGGAACATTAACACAATCAGAAAATGGGATACAACCTCCTGTTGAGTCCAATAAAGTATGTCTTAGCAGAAATCCCCAGTTATTTGACACGAAGACTGAACATACGAATAATCAAGTCCCAGTTTCTGCTGAGTGGAAGGAGGACACTTCTCTATTTGAATCTAGGATGGTATCTGGTGATGTTGAATCTGAATCTTTGCCTACCAGGACTGGAAATGTGCAGGACACTGCAAATTCACTCTTCAGCAATCAGGATCCTTGGAACTTACAGCATGATGATCATCTTTTGCCTCCTAGACCAAATAAAATTCAACCAAGGAGTGAAGCTGTTACCACCAGGGAACCCTTGACAGAGAGTCCTTTCAGGAATATTGGTGAACTAAAAATGGAAGCATTTCTGGATGATGGAGTCTGTCACCCATTGGTTAAGTCAAACAAGGGTACCAATTTCTCAACTGTCCAGTCTGACAAAAGCTCTTCAGAGGAACAAATTAAGAAAGATCTTCAAGCTGTTGCTGAGGGTGTAGCTGCTTCTGTTCTTCAGTCAGCTCAATCCTCCAACTCCGACTTGCATGAAAAAAGTGATTCAGTTTGTGAGATTAGCACAGAAGGAGATGTTCAAAATAATGATGATGTCAGGACAAGACATTCAGAAAAATCAAATCTCGGGTTTCCAATGTCAGAAGGCTTTAGCCACTTGCAGGTAATAAAGAATAGTGACCTTGAAGAACTAAGAGAATTGGGGTCTGGCACCTTTGGCACCGTTTACCATGGAAAATGGAGAGGGACTGATGTTGCTATCAAACGAATCAATGATAGATGTTTTGCTGGGAAGCCTTCTGAACAAGATCGCATGAGGGAAGATTTTTGGAATGAAGCAAATAAGCTTGCTGATTTGCACCACCCAAATGTGGTTGCTTTTTACGGTATTGTGCTTGATGGTCCTGGAGGCTCTGTGGCAACAGTAACAGAATATATGGTTAATGGCTCGCTCAGAAATGCTTTGTTGAAGAATGAAAAGAGTCTTGACAAGCGTAAGCGCCTCTTGATTGCTATGGATGTGGCTTTTGGTATGGAATACCTGCACAGAAAGAATATAGTGCACTTTGATTTAAAAAGTGATAATCTGCTCGTTAACCTTCGAGATCCTCATCGCCCAATATGCAAGGTTGGCGACTTGGGCCTATCCAAGGTGAAACGTCAGACATTGATATCAGGTGGTGTGCGGGGAACACTTCCTTGGATGGCACCCGAGCTTTTGAATGGGAGCAGCAATATGGTGTCCGAGAAGGTTGACGTGTTTTCCTTTGGTATCGTCTTGTGGGAGCTCCTCACTGGAGAAGAACCTTATGCAAATTTGCATTATGGGGTTATCATAGGTGGCATAGTAAGCAACACATTGCGCCCGGAAGTACCGGAATCTTGTGATCCAGAATGGAGGTCACTGATGGAGAGATGCTGGTCATCAGAACCATCAGAGAGGCCAAGCTTCACTGAAATTGCACATGAATTGCGCTCCATGGCTGCAAAGGTTCCCTCGAAAGTACCCAATCAGCAGCAGTAG 4386 44.09 MAFDQNAIPTGLRPLNVARTLVEDPHLTPVATAGRNPQWVAPKLPCDIANTDSVPVPCKGNVSDMGFIEGGYGNVVTGVTAWCPRMPPPLTHTAMVPAAGFGYCSNLNAWGNRGGANAIEFASSCMTVGINHSTNLSHRDGGGGMEFSSNNIVMGSGDSTNLCNKVAANGDHISSDSTSGFSSPLGNSAGGNAVDQVREEGGNSSVPKKKVKFMCSFGGKIFPRPSDGMLRYIGGQTRIISVRRDVTFNEFVRKMVDTCGQAVVIKYQLPDEDLDALVSVSCPDDLDNMMDEYEKLVERSSDGSAKLRMFLFSASELDSAGMVQFGDVHDSGQRYVETVNTIFDGVGGRITRKESFTSATSTQNSDLSATEAMDISYNDLGVVGEPPSTTLSVPEGNLGTSVAIGPGLVKVDTVSAVFVDASAVPSSIPVINSVPPESSSQPEAELGRSVPATLMQQQPDIGFPPPVPQLQPTVDPRQAACVDFIQFRPQLGFSNSHHLGTSGSMFIQQPNTLGITPHQFVPAVHMRMAPSSNLSIMPNTYQSLVQYPQSQPEYFSNASTSGPRFVQLSAEQGYNSRQIPAPPVSVEVGYGLHHVPWSDQTVISDELVSQHQVTFAEKIKRLDDCYLCQKAVPHAHSNSTLQDKRENLTNPVSDSKFSYYSHHPEDHLAAHPMKNITETGALGQQTIEHGVGMQTRIFNPMDPEVEKSSVEAIGFPHHMGSQHENDNTLKDRPNIDHSKISALQGALGRQGDFPSPHVAVVEQIPQPGEVDTLQHQYAAVENRFHPNLDVDKHNICFGGAPILASEYSSHENPKVYSNSPHGIIPNQNATHTGIWYDHLRPIVGNLESLSICPTDICPNLDHCKSPTERTRKEDNFGSYSQPVSEIEVLLDNNSVKPIVVLDTNHVKSTTFACSSSEVPYLMSERPVESSEVAQPPVGGYPGTLTQSENGIQPPVESNKVCLSRNPQLFDTKTEHTNNQVPVSAEWKEDTSLFESRMVSGDVESESLPTRTGNVQDTANSLFSNQDPWNLQHDDHLLPPRPNKIQPRSEAVTTREPLTESPFRNIGELKMEAFLDDGVCHPLVKSNKGTNFSTVQSDKSSSEEQIKKDLQAVAEGVAASVLQSAQSSNSDLHEKSDSVCEISTEGDVQNNDDVRTRHSEKSNLGFPMSEGFSHLQVIKNSDLEELRELGSGTFGTVYHGKWRGTDVAIKRINDRCFAGKPSEQDRMREDFWNEANKLADLHHPNVVAFYGIVLDGPGGSVATVTEYMVNGSLRNALLKNEKSLDKRKRLLIAMDVAFGMEYLHRKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKRQTLISGGVRGTLPWMAPELLNGSSNMVSEKVDVFSFGIVLWELLTGEEPYANLHYGVIIGGIVSNTLRPEVPESCDPEWRSLMERCWSSEPSERPSFTEIAHELRSMAAKVPSKVPNQQQ 1461
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2298864 2304426 - Carg09969-RA Car10g00456 155358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00456 1461 MobiDBLite consensus disorder prediction 175 205 - -
Car10g00456 1461 ProSitePatterns Protein kinases ATP-binding region signature. 1188 1219 IPR017441 GO:0005524
Car10g00456 1461 MobiDBLite consensus disorder prediction 175 190 - -
Car10g00456 1461 MobiDBLite consensus disorder prediction 1037 1056 - -
Car10g00456 1461 ProSiteProfiles Protein kinase domain profile. 1182 1446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car10g00456 1461 Pfam PB1 domain 230 313 IPR000270 GO:0005515
Car10g00456 1461 Pfam Protein tyrosine and serine/threonine kinase 1183 1445 IPR001245 GO:0004672|GO:0006468
Car10g00456 1461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1307 1319 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00837 Car-Chr4:4880540 Car10g00456 Car-Chr10:2298864 4.62E-36 dispersed
Car10g00456 Car-Chr10:2298864 Car18g00264 Car-Chr18:1526836 1.06E-31 dispersed
Car10g00456 Car-Chr10:2298864 Car13g00694 Car-Chr13:8270872 1.90E-30 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89131 PF07714 PK_Tyr_Ser-Thr 3.20E-61 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00456 - - csv:101203826 2372.82