Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00472 ATCTCAGCCTCAAATCTTCGTTCATTCACCCACCGTGCGACCACCCCACCAAAACCCTTGTTTCTTCGTCCTTCTCCTTCGTTTCGTGGGGTTCGTGTCTGTGTGTGTTTCGCCATGGGCGTCGTCACCATTCTTCCAGATCTCGGCACTCAGATTTTCATCCCGGTCTGTGCTGTAGTAGGAATAGTCTTCTCTTTGGTGCAGTGGTACTATGTCTCTCAGGTTAAGCTGTCGCCTAGTCGAGATTCCACTCATAACAACTCCGCCGCTGCTAAAAATGGCTACTCCGACTACCTTATCGAGGAGGAAGAAGGAGTCAACGACCATAACGTTGTTATTAAGTGTGCCGAAATTCAGAATGCTATCTCTGAGGGGGCAACCTCCTTCCTGTTCACGGAGTACAAGTATGTTGGCATCTTTATGGTGTTGTTTGCAGTCTTGATTTTCGTGTTCCTTGGCTCAGTGGAGGGTTTTAGTACCGAGCCTCAAGCGTGCACTTATGACAAAACAAAGATTTGCAAGCCCGCTTTGGCGACGGCTATATTCAGCACTATATCATTTTTACTTGGTGCAGTTACTTCAGTGGTTTCTGGTTTCCTTGGAATGAAAATTGCCACATATGCAAATGCCAGAACCACCTTGGAGGCAAGAAAAGGTGTTGGAAAGGCATTTATTACTGCTTTTAGGTCTGGTGCTGTCATGGGCTTCCTCCTAGCTGCCAATGGTCTCTTGGTTTTGTTTATTGCCATTAACGTCTTCAAGTTGTACTATGGCGAAGATTGGGGTGGCCTTTTTGAGTCTATCACTGGGTATGGTCTTGGTGGATCTTCGATGGCTCTCTTTGGTAGAGTTGGTGGTGGTATCTACACTAAAGCTGCTGATGTTGGTGCTGACCTTGTGGGCAAGGTGGAAAGGAACATTCCTGAGGATGATCCAAGAAACCCAGCTGTCATTGCTGATAATGTCGGTGACAATGTTGGGGATATTGCTGGTATGGGATCTGATCTTTTTGGTTCATATGCTGAATCATCCTGTGCTGCTCTTGTTGTTGCTTCTATCTCTTCTTTTGGCAACAACCATGAGCTGACACCAATGCTCTATCCACTCATAGTTAGTTCTGTGGGTATCCTTGTTTGCCTGATCACCACCTTATTTGCTACTGATTTCTTTGAGATCAAGGCTGTTAAGGAAATTGAGCCAGCATTGAAGAAGCAACTCATAATTTCCACTGTTCTAATGACCTTTGGAATTGCCATTGTTACTTGGCTAGCTGTTCCATCAACATTCACCATTTTCAATTTTGGAACTCAAAAAGTTGTACAGAACTGGAAACTTTTCTTGTGCGTTGCTGTCGGTCTTTGGGCTGGGCTTATAATAGGATTTGTGACAGAGTACTATACTAGCAATGCATACAGCCCTGTGCAGGATGTTGCTGATTCCTGCCGAACCGGAGCTGCTACAAATGTTATTTTTGGCTTGGCTTTGGGATACAAATCTGTCATTATCCCCATTTTTGCAATTGCAGTTAGCATTTTTGTTAGTTTCACCTTTGCTGCAATGTACGGCATTGCTGTTGCTGCTCTTGGAATGTTGAGTACAATAGCTACTGGTTTGGCCATTGATGCATATGGTCCAATCAGTGACAATGCTGGAGGCATTGCAGAGATGGCAGGCATGAGCCACAGAATTCGGGAGAGAACCGATGCCCTTGATGCTGCAGGAAACACAACTGCAGCCATTGGAAAGGGTTTTGCCATTGGTTCAGCTGCTCTTGTGTCCCTTGCCCTCTTCGGCGCCTTCGTCAGCCGTGCTGGTGTCACTTCTGTTGATGTCTTGACACCCAAAGTTTTCATTGGCTTGATCGTAGGTGCTATGCTGCCGTACTGGTTTTCTGCCATGACAATGAAGAGTGTTGGGAGTGCAGCCCTAAAGATGGTCGAGGAGGTGCGAAGACAATTCAACACCATCCCAGGTCTCATGGAGGGCACTGCCAAGCCCGACTACGCTACATGTGTCAAGATCTCAACTGATGCTTCTATCAAGGAGATGATCCCACCTGGTGCCCTTGTCATGTTGACACCCCTAATTGTCGGTATCCTATTCGGAGTCGAAACTCTTTCTGGCGTCCTTGCTGGATCCCTTGTTTCTGGCGTTCAGATCGCCATCTCTGCATCCAACACCGGAGGTGCCTGGGATAACGCTAAGAAGTACATCGAGGCTGGTGCCTCTGAGCATGCAAGAACCCTCGGACCGAAAGGATCAGATCCACACAAAGCCGCTGTTATCGGCGACACGATCGGAGACCCGCTCAAGGACACCTCCGGGCCTTCTCTCAACATTCTCATCAAGCTGATGGCTGTGGAGTCCCTTGTGTTTGCTCCTTTCTTTGCCACTCACGGTGGGCTTCTCTTCAAGCTCTAG 2421 47.38 ISASNLRSFTHRATTPPKPLFLRPSPSFRGVRVCVCFAMGVVTILPDLGTQIFIPVCAVVGIVFSLVQWYYVSQVKLSPSRDSTHNNSAAAKNGYSDYLIEEEEGVNDHNVVIKCAEIQNAISEGATSFLFTEYKYVGIFMVLFAVLIFVFLGSVEGFSTEPQACTYDKTKICKPALATAIFSTISFLLGAVTSVVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLFIAINVFKLYYGEDWGGLFESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGNNHELTPMLYPLIVSSVGILVCLITTLFATDFFEIKAVKEIEPALKKQLIISTVLMTFGIAIVTWLAVPSTFTIFNFGTQKVVQNWKLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFTFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGVTSVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKL 806
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2361594 2365727 - Carg09952-RA Car10g00472 155374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00472 806 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 48 797 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Car10g00472 806 Pfam Inorganic H+ pyrophosphatase 82 792 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00472 Car11g00393 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00472 Car-Chr10:2361594 Car12g00993 Car-Chr12:9955228 0 dispersed
Car10g00472 Car-Chr10:2361594 Car11g00393 Car-Chr11:2159840 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00472 K23025 - csv:101222673 1424.07