Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00511 ATGGGGCAAACCAAAGCCATTTGGTGGGTTTTTCTGGGAATTCTAGCAATGATTTTGCCTGTAAAAGCTCAGCTGGCTGTTGGGTTTTACTCCAAATCTTGTCCTAGAGCTGAGTCCATTGTCAGGTCCACTGTTCAGTCATATTACAAGGCTGATCCCACCATCGCCGCTGGGTTGCTCAGGCTTCACTTCCATGACTGTTTCGTTCAGGGGTGCGATGGTTCAGTGTTGATCATGGACGAACGAGCTGAAATAAATGCAGGGCCAAACATGGGGTTGAGAGGCTTTGAAGTAGTCGATGATGCAAAAGCTCAGCTTGAAAATCTATGCCCTGGGGTTGTTTCTTGCGCGGATATACTTGCTTTGGCTACTCGTGATGCTGTAGACTTGAGTGATGGCCCAAGCTGGTCTGTGCCCACTGGAAGAAGGGATGGGAGAGTGTCTATCAGTTTCCAGGCTGAGGATCTTCCTTCTCCATTTGAGCCCATTGATGTCCACATACAGAAGTTCGCTGAGAAAGGGCTTACTGAAGAAGATCTTGTAACCCTAGTTGGTGCGCACACGATCGGACGAACAGACTGCCAACTATTCAGTTACCGACTACAGAACTTCACAAGCACAGGGAATGCAGACCCAACCATAAACCCATCCTTCTTGACCCAACTCAGAACGCTGTGCCCCTTAGATGGAGATCCATTCAGAGGCGTGGCAATGGACAAGGACAGCCAGTTGAGATTCGACAACAGCTTCTTCAAGAACTTGGTCAATGGAAATGGGGTTTTGGAGTCGGACCAGAGGCTGTGGCAACACGCTTCAACCAAAGACATTGTGCAGAGGTATGCCGGCAACTTAAGGGGCTTGCTCGGCCTCAGATTTAACTATGAGTTCAAGAAAGCCATGGTTAAGCTGAGTAGCCTCGACGTCAAGACCGGCACACAAGGGGAGATTAGAAAACTCTGTTCCCAGTTCAATAACCAGTGA 981 48.83 MGQTKAIWWVFLGILAMILPVKAQLAVGFYSKSCPRAESIVRSTVQSYYKADPTIAAGLLRLHFHDCFVQGCDGSVLIMDERAEINAGPNMGLRGFEVVDDAKAQLENLCPGVVSCADILALATRDAVDLSDGPSWSVPTGRRDGRVSISFQAEDLPSPFEPIDVHIQKFAEKGLTEEDLVTLVGAHTIGRTDCQLFSYRLQNFTSTGNADPTINPSFLTQLRTLCPLDGDPFRGVAMDKDSQLRFDNSFFKNLVNGNGVLESDQRLWQHASTKDIVQRYAGNLRGLLGLRFNYEFKKAMVKLSSLDVKTGTQGEIRKLCSQFNNQ 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2562428 2564908 + Carg09913-RA Car10g00511 155413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00511 326 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Car10g00511 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 179 189 IPR019793 -
Car10g00511 326 Pfam Peroxidase 41 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car10g00511 326 ProSiteProfiles Plant heme peroxidase family profile. 24 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00173 Car-Chr8:1048815 Car10g00511 Car-Chr10:2562428 1.64E-59 dispersed
Car10g00511 Car-Chr10:2562428 Car19g00213 Car-Chr19:2057936 7.19E-128 dispersed
Car10g00511 Car-Chr10:2562428 Car03g00891 Car-Chr3:7086082 1.50E-88 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00511 K00430 - csv:101214998 576.63