Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00532 ATGGAGGAGGAGTTGGAATCAGCGGTGGAGGTGCCATTTGGGGTGGCGGCGGCGGCGGTGGTGGTGGCGGCGGTGGTGGTGATTTTGGGTGCAAAAATGGGGTTGGTGTTATGGTGGAAGCCAAGAAGGATAGAGAAGCACTTTCTCCGGCAAGGAATTGGAGGACCGCCGTATCGTTTCTTTATTGGTAATTTCAAAGAATTGGTTTCCATGATGGCGGCGGCTTCTTCCCATCCAATGCCCAATTTATCTCATAATATTCTGCCACGTGTCCTCTCCTTCTATCATCACTGGAAGAAGATTTACGGCTCTACGTTTGTGATCTGGTTCGGACCCATTGCTCGAGTTGCAGTATCCGACCCCGACATGATCCGAGAAATCTTCATCACTAACTCCCATTTTTACGAGAAAAACGAAGCCCATCCACTCGTTAAACAGCTCGAAGGCGACGGCCTCCTCACTCTCAATGGCCCAAAATGGGCTCTCCATCGCAAAATCATCTCCCCCACTTTTCACATGGACAATCTCAAAAAATGGTCGTCTATGACGGAGGAAACGACCTCGGGCGAGGTGGAGATTGATGTTTTCGATAGCTTCCAAATGCTAACTGAAGATGTCATAACGAAAACAGCGTTCAGTTGTAGCTATGAAGATGGTAAAGCGATTTTCAAGCTTCAAACTCAACAAATGATATTAGCTTCACAAGCTTTTCAAAAGGGGCGAAAACGGAATTTTGAAAAGAATTGGGCAATTAATGAAAAAGGACCAAAAGATTTGTTGGGGCTCATGATCCAAGCTTCCATTTCTGTCAATGACATCGTGGAAGAATGCAAAAGCTTCTTCTTTGCTGGCAAACAGACCACTTCCAATCTGATGACGTGGACTACTGTCTTGCTGGCAATGCATCCACGCTGGCAAATTCTGGCACGTCATGAGGTCTTTACCATCTGCGGTCCACGTGCCCTCCCCTCCTCTGATGACGTGTCCAAGTTCAAAATTCTGAGCATGATACTAAATGAATCCTTACGATTGTACCCACCCACCGTGGCTACAATCAGACGTGCAAATGCTGACGTGGAGCTAGGTGGACGAATGATCCCACGTGGCACGGAGTTTTTGATTCCAATCCTTGCCGTTCATCATGATCAAACTATTTGGGGCAACGATGCAAGTGAGTTTAATCCAGAGCGATTCTCAGACGGAGTAAGCCGAGCTGGAAATCATCCAGTTGGGTTCATTCCATTCGGACTTGGGGTGCGGAATTGCATCGGCCAAAATCTAGCAGTTTTGGAAGCAAAGTTGGCAATGGTGATTATACTTCAACGTCTCTCGTTTCGATTAGCTCCTACTTATCAGCATGCACCGGCTGTTATGATGCTTCTTTATCCACAATATGGCGCTCCCATTCTTTTTGAAAAGATACCCTTAAATCAAAATTACTAG 1443 46.5 MEEELESAVEVPFGVAAAAVVVAAVVVILGAKMGLVLWWKPRRIEKHFLRQGIGGPPYRFFIGNFKELVSMMAAASSHPMPNLSHNILPRVLSFYHHWKKIYGSTFVIWFGPIARVAVSDPDMIREIFITNSHFYEKNEAHPLVKQLEGDGLLTLNGPKWALHRKIISPTFHMDNLKKWSSMTEETTSGEVEIDVFDSFQMLTEDVITKTAFSCSYEDGKAIFKLQTQQMILASQAFQKGRKRNFEKNWAINEKGPKDLLGLMIQASISVNDIVEECKSFFFAGKQTTSNLMTWTTVLLAMHPRWQILARHEVFTICGPRALPSSDDVSKFKILSMILNESLRLYPPTVATIRRANADVELGGRMIPRGTEFLIPILAVHHDQTIWGNDASEFNPERFSDGVSRAGNHPVGFIPFGLGVRNCIGQNLAVLEAKLAMVIILQRLSFRLAPTYQHAPAVMMLLYPQYGAPILFEKIPLNQNY 480
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2662511 2664732 - Carg09892-RA Car10g00532 155434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00532 480 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
Car10g00532 480 Pfam Cytochrome P450 92 221 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car10g00532 480 Pfam Cytochrome P450 242 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g01229 Car10g00532 CCT
Car10g00532 Car12g01199 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g00149 Car-Chr9:722058 Car10g00532 Car-Chr10:2662511 5.02E-36 dispersed
Car10g00532 Car-Chr10:2662511 Car15g00193 Car-Chr15:1029088 1.30E-97 dispersed
Car16g00763 Car-Chr16:4840678 Car10g00532 Car-Chr10:2662511 7.81E-28 dispersed
Car10g00677 Car-Chr10:3500802 Car10g00532 Car-Chr10:2662511 4.14E-21 transposed
Car10g00532 Car-Chr10:2662511 Car11g00434 Car-Chr11:2440131 0 wgd
Car10g00532 Car-Chr10:2662511 Car12g01199 Car-Chr12:11411729 2.88E-116 wgd
Car10g00532 Car-Chr10:2662511 Car05g01229 Car-Chr5:11516646 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00532 K15639 - csv:101213466 767.689