Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00559 ATGGGTTCCTTCAAAAGTGATCAAAATGTGAGCTTTGCTGCTCCGAGGGCATTTGGGAAGAGGCTGAAATCGGATCTGAAAGAGACGTTTTTCCCTGATGATCCGTTCAGGCAGTTTGGAGATGGCGGAGGGGCTGTGCAGCGAGTGAAAAAGGTCCTCAAGTATTTCATTCCCATATTGGAATGGCTTCCTAAATACAACTTGAGTATGTTTAAGTATGATTTGCTTGCTGGTATTACCATTACCAGCCTCGCTATTCCCCAAGGCATCAGCTACGCCAAGCTCGCCTCCCTCCCTCCCATCATTGGCCTTTATTCCAGCTTCGTTCCTCCGCTTGTATATGCAGTGTTTGGAAGCTCCAAGCATCTGGCGGTGGGGACAGTGGCGGCATGTTCCTTGCTCATCTCGCAAATCATCGGACGAGTGGCGTCCCCGGAAGAAGAACCCACATTGTATCTCCACTTGGTTTTCACCGCCACCCTTGTTACCGGCGTCTTTCAGGCCACCTTAGGCTTTCTACGACTGGGAATTTTGGTGGATTTCTTATCGCACTCGACAATACTCGGGTTTATGGGAGGGACGGCTGTGATCATTTCCCTGCAACAGCTGAAAGGCATGCTTGGACTCACTCATTTCACCTCAAAAACTGACGTTTTTTCGGTACTTCACGCAGTGTTCACCCGTACAAATGAGTGGAAATGGCAAAGTGCTGTCGTCGGCATCGTCTTCCTTCTATTCCTCCAGTTTACAAGGTTCCTGAGAAACAGAAACCCCAAGCTATTCTGGGTGTCAGCGATGGCTCCCATGGTGACAGTGGTAGTCGGGTGTTTATTTGCTTATTTCATCAATGGAAGTCAGCATGGAATCTTAACTGTGGGTCACTTGAGCAAAGGAATAAACCCTGTTTCCATTCACTTCCTCAACTTCGACTCCAAATATATATCAGTTGTCGTACAAACTGGCTTGATCACTGCCCTTGTGGCTTTGGCTGAAGGAATAGCAATTGGTCGGAGCTTTGCAATCATGAAAAATGAACAAATCGATGGGAACAAGGAGATGGTAGCCTTTGGTTTAATGAACATCCTCGGATCTTTCACTTCCTGCTACCTAACCACTGGGCCATTCTCAAAGACTGCAGTGAACTTCAATGCTGGGTGTAGGACAGCCATGTCAAACATAGTCATGGCGATCTTCATGGCTCTCACCCTCCTCTTTCTAGCTCCTCTCTTTAGCTACACACCTCTTGTAACCCTTTCCGCCATTATCATGTCCGCCATGTTTGGTCTCATCAAGTATGAAGAAATGTACCATCTTCTCAAGGTCGACAAGTTTGATTTCTGCATATGTATGGTGGCTTTCTTGGGCGTTGCCCTCTTAAGCATGGACGTTGGCATCATGCTTTCGGTGGGACTTGCTTTGCTGAGAGCTCTGCTTTACATGGCTAGACCAGCCACTTGCAAACTCGGGAAAATAACAAACTCCAGTTTGTATAGAGACGTGGAACAGTACCCAAATGCAACAAGAACCCCTGGAATTATTGTTCTTCAACTTGGTTCCCCTGTTTATTACGCCAACGCCAACTACATCAGAGAAAGGATTTTCAGATGGGTTCGTGATGAGCAGACCATATCTGATACCAACGATGGATCCGTCGAACATGTACTGCTGGAGTTGAGCGGAGTTACCTCCATCGACATGACAGGGATCGAAACTCTAGTTGAAATCCGCAGATCATTACAAGCAAACGGAATCCAGATGGGAATTATAAACCCAAGAATAGTAGTGATGGAGAAGATGATAGCTTCGGATTTCACAGAAACAATCGGGAAAGAGAACATTTATTTGTCGGTAGACGATGGAGTGGAAAGGTGCAGAGATTTGGTTCCCAAATTAAAGCAAACAGATGGAAGTGGTGAAAGTTCCATTAGTTTTGCAATGGAGCAGCTGCACAGGAATTTGAATCTGCAATAA 1971 46.22 MGSFKSDQNVSFAAPRAFGKRLKSDLKETFFPDDPFRQFGDGGGAVQRVKKVLKYFIPILEWLPKYNLSMFKYDLLAGITITSLAIPQGISYAKLASLPPIIGLYSSFVPPLVYAVFGSSKHLAVGTVAACSLLISQIIGRVASPEEEPTLYLHLVFTATLVTGVFQATLGFLRLGILVDFLSHSTILGFMGGTAVIISLQQLKGMLGLTHFTSKTDVFSVLHAVFTRTNEWKWQSAVVGIVFLLFLQFTRFLRNRNPKLFWVSAMAPMVTVVVGCLFAYFINGSQHGILTVGHLSKGINPVSIHFLNFDSKYISVVVQTGLITALVALAEGIAIGRSFAIMKNEQIDGNKEMVAFGLMNILGSFTSCYLTTGPFSKTAVNFNAGCRTAMSNIVMAIFMALTLLFLAPLFSYTPLVTLSAIIMSAMFGLIKYEEMYHLLKVDKFDFCICMVAFLGVALLSMDVGIMLSVGLALLRALLYMARPATCKLGKITNSSLYRDVEQYPNATRTPGIIVLQLGSPVYYANANYIRERIFRWVRDEQTISDTNDGSVEHVLLELSGVTSIDMTGIETLVEIRRSLQANGIQMGIINPRIVVMEKMIASDFTETIGKENIYLSVDDGVERCRDLVPKLKQTDGSGESSISFAMEQLHRNLNLQ 656
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2824542 2828001 - Carg09865-RA Car10g00559 155461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00559 656 ProSitePatterns SLC26A transporters signature. 100 121 IPR018045 GO:0008271|GO:0008272
Car10g00559 656 Pfam Sulfate permease family 71 452 IPR011547 GO:0016021
Car10g00559 656 ProSiteProfiles STAS domain profile. 502 624 IPR002645 -
Car10g00559 656 Pfam STAS domain 503 619 IPR002645 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g01192 Car-Chr6:8732347 Car10g00559 Car-Chr10:2824542 0 dispersed
Car10g00559 Car-Chr10:2824542 Car14g01569 Car-Chr14:12815470 0 dispersed
Car10g00559 Car-Chr10:2824542 Car11g00469 Car-Chr11:2573890 0 wgd
Car10g00559 Car-Chr10:2824542 Car17g00760 Car-Chr17:6724810 0 wgd
Car10g00559 Car-Chr10:2824542 Car08g00573 Car-Chr8:3785602 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00559 K17471 - csv:116402148 1094.34