Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car10g00573 | ATGTCGTCTCCGTCTCCGAGCTCTCCGCCGGCGCCTAGTACGACCTCACCCCTACCTCCGACCACCGACGCACCACCCCCGGCGGAGCCGTCTCTCTCACCGCCGTCTCCTGACGCTGCCTCTCAGCCTCCACCTGCTACATCCCTGCCGCCTTCTACCACTCCTTCGCCGCCGCCTCCGGACAGTGCTACTCCATCCCCGCCACCTCCGGACAGTGCTACTCCTTCGCCGCCGCCTCCGGACAGTGCTACTCCATCCCCACCGCCTCCTGACAGTGCTACTCCATCCCCGCCTACTACTTCTCCTTTACCACCTACAGCTCCTAAGAGCTCTTCGCCGCCGCCGCCGGACAGTGCCACTCCATCTCCGCCTACTTCTTTACCGCCTACATCGCCTTCGGGCTCTTCGCCGCCGCCGCCGCCGTCGAATTCTAGTACACCTACTAGTCCAGGAGGACATGTCGCCCCGCCGTCGAATTCTAGTACACCTACGAGTCCAGGAGGACATGACGCCCCGCCGTCGCATTCTGGTACACCAACGAATCCGGGAGGAAATGAGGCTCCGCCGTCTTTCTCACCGTCGTCGGGAGTTTCGGCTGGACTTGTGACTGGAGTTGTCATTGCTGGAGTGGTGGTGGTGGTTGCTGCGTTCATTCTTTTGGTTTTGTGTTTAAGAAAGAAGAGAAGACGTGACGAGGAGTCGTACTACCGGCCGCCGCCACCGGGGGCGTTTAAAGATGGCCCATATGGTCCCCAACAGCACCACTGGCAATCACATCTGCCGCCGTTGCCGCCGACTAATCATGTCGTGGGGACAGTACCGAAGCCGTCCCCTCCGCCAGCATCACGACCACCGCCGTCTCCTTCACCAGCATCACGACCACAGCCGTCACCTCCGATTATAAACAGCAGCGGAGGATCTGGATCTTATTATTCAGGGTCTGAATATTCGCATGCTCCTGTTCCTGCTCCTTCTCCTGCTCCATCTTCTATTCCCTTGGGCTACTCGCAAAGCAGCTTCACTTATGAAGAGTTAGCAATGGCGACAGACAGGTTTTCAGAAGCCAATCTCCTTGGACAAGGTGGGTTTGGTTATGTGCATAAAGGAGTCCTTCCAAACGGAAAGGAAGTGGCAGTGAAACAACTCAAGGCTGGAAGTGGACAGGGAGAGCGTGAATTTCAAGCAGAAGTGGAAATAATCAGCCGTGTTCATCATAGACATCTTGTTTCCTTGGTGGGGTATTGCATCACCGGCTCCCAAAGATTGCTGGTTTATGAATTTGTTCCAAACAACACATTGGAGTTCCACTTGCACGGGAAAGGACGACCCACTATGGATTGGCCAACGAGACTGAAAATTGCTCTTGGAGCTGCCAAGGGATTGGCCTACCTTCATGAAGACTGTAATCCTAAGATCATTCATCGTGACATCAAAGCTGCAAATATACTTCTGGATCTCAAATTCGAAGCAATGGTTGCAGATTTTGGGCTTGCCAAATTGTCTTCTGATGTTAATACCCATGTTTCAACTCGAGTTATGGGAACTTTCGGCTACCTTGCTCCTGAATACGCTTCAAGTGGGAAACTCACTGATAAATCAGATGTCTTCTCCTTCGGAGTGATGCTTTTGGAGATGATTACTGGACGCAGACCTGTGGACACAACTCAATCATACATGGACGATGGACTGCTCGATTGGGCAAGGCCATTACTACTTAGGGCCGCAGAAGATGGGAACTACGATGGTCTAGTAGATCCAAAGCTGCGAGATAACTACGACCAGAATGAGATGGGTCGGATGATTGCTTGTGCAGCTGCCTGTGTGCGCCATTCGGCGAGGCGCCGGCCACGGATGAGTCAAGTGGTTCATGCTCTTGAAGGTGAAGCCTCGCTTTCTGATCTTAACAAAGGGGTTCAGCCTGGACATAGCAGCGTCTACAGTTCTCATGGAAGCTCCGACTACGACACATCTCAGTACAATGAGGACATGAAGAAGTTCAGGAAGATGGCATTGGCAAGCCAGGAGTACGGCAGCGAGTACAGCGAGCCGACTAGTGAGTATGGTTTGTATCCATCTGGGTCGAGTGGCGATGGCCCAACAACAAGGGAAATGGAAATGAGAACAATGAAGACAGAAAGTGGAGGTTCTTGA | 2151 | 53.46 | MSSPSPSSPPAPSTTSPLPPTTDAPPPAEPSLSPPSPDAASQPPPATSLPPSTTPSPPPPDSATPSPPPPDSATPSPPPPDSATPSPPPPDSATPSPPTTSPLPPTAPKSSSPPPPDSATPSPPTSLPPTSPSGSSPPPPPSNSSTPTSPGGHVAPPSNSSTPTSPGGHDAPPSHSGTPTNPGGNEAPPSFSPSSGVSAGLVTGVVIAGVVVVVAAFILLVLCLRKKRRRDEESYYRPPPPGAFKDGPYGPQQHHWQSHLPPLPPTNHVVGTVPKPSPPPASRPPPSPSPASRPQPSPPIINSSGGSGSYYSGSEYSHAPVPAPSPAPSSIPLGYSQSSFTYEELAMATDRFSEANLLGQGGFGYVHKGVLPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHRHLVSLVGYCITGSQRLLVYEFVPNNTLEFHLHGKGRPTMDWPTRLKIALGAAKGLAYLHEDCNPKIIHRDIKAANILLDLKFEAMVADFGLAKLSSDVNTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSFGVMLLEMITGRRPVDTTQSYMDDGLLDWARPLLLRAAEDGNYDGLVDPKLRDNYDQNEMGRMIACAAACVRHSARRRPRMSQVVHALEGEASLSDLNKGVQPGHSSVYSSHGSSDYDTSQYNEDMKKFRKMALASQEYGSEYSEPTSEYGLYPSGSSGDGPTTREMEMRTMKTESGGS | 716 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 2897136 | 2899845 | + | Carg09851-RA | Car10g00573 | 155475 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car10g00573 | 716 | MobiDBLite | consensus disorder prediction | 1 | 195 | - | - | |
Car10g00573 | 716 | MobiDBLite | consensus disorder prediction | 229 | 327 | - | - | |
Car10g00573 | 716 | ProSitePatterns | Protein kinases ATP-binding region signature. | 358 | 380 | IPR017441 | GO:0005524 | |
Car10g00573 | 716 | Pfam | Protein tyrosine and serine/threonine kinase | 356 | 624 | IPR001245 | GO:0004672|GO:0006468 | |
Car10g00573 | 716 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 472 | 484 | IPR008271 | GO:0004672|GO:0006468 | |
Car10g00573 | 716 | MobiDBLite | consensus disorder prediction | 633 | 657 | - | - | |
Car10g00573 | 716 | MobiDBLite | consensus disorder prediction | 147 | 195 | - | - | |
Car10g00573 | 716 | MobiDBLite | consensus disorder prediction | 1 | 146 | - | - | |
Car10g00573 | 716 | ProSiteProfiles | Protein kinase domain profile. | 352 | 631 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car10g00573 | 716 | MobiDBLite | consensus disorder prediction | 636 | 657 | - | - | |
Car10g00573 | 716 | MobiDBLite | consensus disorder prediction | 298 | 314 | - | - | |
Car10g00573 | 716 | MobiDBLite | consensus disorder prediction | 677 | 701 | - | - | |
Car10g00573 | 716 | MobiDBLite | consensus disorder prediction | 676 | 716 | - | - | |
Car10g00573 | 716 | MobiDBLite | consensus disorder prediction | 267 | 297 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car10g00573 | Car12g01220 | CCT | |
Car10g00573 | Car11g00491 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car02g00265 | Car-Chr2:1803418 | Car10g00573 | Car-Chr10:2897136 | 0 | dispersed | |
Car10g00573 | Car-Chr10:2897136 | Car18g00729 | Car-Chr18:8428061 | 2.62E-163 | dispersed | |
Car10g00638 | Car-Chr10:3239659 | Car10g00573 | Car-Chr10:2897136 | 7.88E-09 | dispersed | |
Car13g00686 | Car-Chr13:8239898 | Car10g00573 | Car-Chr10:2897136 | 1.02E-63 | dispersed | |
Car18g00258 | Car-Chr18:1492969 | Car10g00573 | Car-Chr10:2897136 | 1.10E-61 | dispersed | |
Car04g00723 | Car-Chr4:4191548 | Car10g00573 | Car-Chr10:2897136 | 6.74E-176 | transposed | |
Car10g00573 | Car-Chr10:2897136 | Car11g00491 | Car-Chr11:2668055 | 1.06E-169 | wgd | |
Car10g00573 | Car-Chr10:2897136 | Car12g01220 | Car-Chr12:11628396 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
89137 | PF07714 | PK_Tyr_Ser-Thr | 9.90E-45 | CL0016 | Car | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car10g00573 | - | - | cpep:111779918 | 1017.68 |