Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00573 ATGTCGTCTCCGTCTCCGAGCTCTCCGCCGGCGCCTAGTACGACCTCACCCCTACCTCCGACCACCGACGCACCACCCCCGGCGGAGCCGTCTCTCTCACCGCCGTCTCCTGACGCTGCCTCTCAGCCTCCACCTGCTACATCCCTGCCGCCTTCTACCACTCCTTCGCCGCCGCCTCCGGACAGTGCTACTCCATCCCCGCCACCTCCGGACAGTGCTACTCCTTCGCCGCCGCCTCCGGACAGTGCTACTCCATCCCCACCGCCTCCTGACAGTGCTACTCCATCCCCGCCTACTACTTCTCCTTTACCACCTACAGCTCCTAAGAGCTCTTCGCCGCCGCCGCCGGACAGTGCCACTCCATCTCCGCCTACTTCTTTACCGCCTACATCGCCTTCGGGCTCTTCGCCGCCGCCGCCGCCGTCGAATTCTAGTACACCTACTAGTCCAGGAGGACATGTCGCCCCGCCGTCGAATTCTAGTACACCTACGAGTCCAGGAGGACATGACGCCCCGCCGTCGCATTCTGGTACACCAACGAATCCGGGAGGAAATGAGGCTCCGCCGTCTTTCTCACCGTCGTCGGGAGTTTCGGCTGGACTTGTGACTGGAGTTGTCATTGCTGGAGTGGTGGTGGTGGTTGCTGCGTTCATTCTTTTGGTTTTGTGTTTAAGAAAGAAGAGAAGACGTGACGAGGAGTCGTACTACCGGCCGCCGCCACCGGGGGCGTTTAAAGATGGCCCATATGGTCCCCAACAGCACCACTGGCAATCACATCTGCCGCCGTTGCCGCCGACTAATCATGTCGTGGGGACAGTACCGAAGCCGTCCCCTCCGCCAGCATCACGACCACCGCCGTCTCCTTCACCAGCATCACGACCACAGCCGTCACCTCCGATTATAAACAGCAGCGGAGGATCTGGATCTTATTATTCAGGGTCTGAATATTCGCATGCTCCTGTTCCTGCTCCTTCTCCTGCTCCATCTTCTATTCCCTTGGGCTACTCGCAAAGCAGCTTCACTTATGAAGAGTTAGCAATGGCGACAGACAGGTTTTCAGAAGCCAATCTCCTTGGACAAGGTGGGTTTGGTTATGTGCATAAAGGAGTCCTTCCAAACGGAAAGGAAGTGGCAGTGAAACAACTCAAGGCTGGAAGTGGACAGGGAGAGCGTGAATTTCAAGCAGAAGTGGAAATAATCAGCCGTGTTCATCATAGACATCTTGTTTCCTTGGTGGGGTATTGCATCACCGGCTCCCAAAGATTGCTGGTTTATGAATTTGTTCCAAACAACACATTGGAGTTCCACTTGCACGGGAAAGGACGACCCACTATGGATTGGCCAACGAGACTGAAAATTGCTCTTGGAGCTGCCAAGGGATTGGCCTACCTTCATGAAGACTGTAATCCTAAGATCATTCATCGTGACATCAAAGCTGCAAATATACTTCTGGATCTCAAATTCGAAGCAATGGTTGCAGATTTTGGGCTTGCCAAATTGTCTTCTGATGTTAATACCCATGTTTCAACTCGAGTTATGGGAACTTTCGGCTACCTTGCTCCTGAATACGCTTCAAGTGGGAAACTCACTGATAAATCAGATGTCTTCTCCTTCGGAGTGATGCTTTTGGAGATGATTACTGGACGCAGACCTGTGGACACAACTCAATCATACATGGACGATGGACTGCTCGATTGGGCAAGGCCATTACTACTTAGGGCCGCAGAAGATGGGAACTACGATGGTCTAGTAGATCCAAAGCTGCGAGATAACTACGACCAGAATGAGATGGGTCGGATGATTGCTTGTGCAGCTGCCTGTGTGCGCCATTCGGCGAGGCGCCGGCCACGGATGAGTCAAGTGGTTCATGCTCTTGAAGGTGAAGCCTCGCTTTCTGATCTTAACAAAGGGGTTCAGCCTGGACATAGCAGCGTCTACAGTTCTCATGGAAGCTCCGACTACGACACATCTCAGTACAATGAGGACATGAAGAAGTTCAGGAAGATGGCATTGGCAAGCCAGGAGTACGGCAGCGAGTACAGCGAGCCGACTAGTGAGTATGGTTTGTATCCATCTGGGTCGAGTGGCGATGGCCCAACAACAAGGGAAATGGAAATGAGAACAATGAAGACAGAAAGTGGAGGTTCTTGA 2151 53.46 MSSPSPSSPPAPSTTSPLPPTTDAPPPAEPSLSPPSPDAASQPPPATSLPPSTTPSPPPPDSATPSPPPPDSATPSPPPPDSATPSPPPPDSATPSPPTTSPLPPTAPKSSSPPPPDSATPSPPTSLPPTSPSGSSPPPPPSNSSTPTSPGGHVAPPSNSSTPTSPGGHDAPPSHSGTPTNPGGNEAPPSFSPSSGVSAGLVTGVVIAGVVVVVAAFILLVLCLRKKRRRDEESYYRPPPPGAFKDGPYGPQQHHWQSHLPPLPPTNHVVGTVPKPSPPPASRPPPSPSPASRPQPSPPIINSSGGSGSYYSGSEYSHAPVPAPSPAPSSIPLGYSQSSFTYEELAMATDRFSEANLLGQGGFGYVHKGVLPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHRHLVSLVGYCITGSQRLLVYEFVPNNTLEFHLHGKGRPTMDWPTRLKIALGAAKGLAYLHEDCNPKIIHRDIKAANILLDLKFEAMVADFGLAKLSSDVNTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSFGVMLLEMITGRRPVDTTQSYMDDGLLDWARPLLLRAAEDGNYDGLVDPKLRDNYDQNEMGRMIACAAACVRHSARRRPRMSQVVHALEGEASLSDLNKGVQPGHSSVYSSHGSSDYDTSQYNEDMKKFRKMALASQEYGSEYSEPTSEYGLYPSGSSGDGPTTREMEMRTMKTESGGS 716
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2897136 2899845 + Carg09851-RA Car10g00573 155475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00573 716 MobiDBLite consensus disorder prediction 1 195 - -
Car10g00573 716 MobiDBLite consensus disorder prediction 229 327 - -
Car10g00573 716 ProSitePatterns Protein kinases ATP-binding region signature. 358 380 IPR017441 GO:0005524
Car10g00573 716 Pfam Protein tyrosine and serine/threonine kinase 356 624 IPR001245 GO:0004672|GO:0006468
Car10g00573 716 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Car10g00573 716 MobiDBLite consensus disorder prediction 633 657 - -
Car10g00573 716 MobiDBLite consensus disorder prediction 147 195 - -
Car10g00573 716 MobiDBLite consensus disorder prediction 1 146 - -
Car10g00573 716 ProSiteProfiles Protein kinase domain profile. 352 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car10g00573 716 MobiDBLite consensus disorder prediction 636 657 - -
Car10g00573 716 MobiDBLite consensus disorder prediction 298 314 - -
Car10g00573 716 MobiDBLite consensus disorder prediction 677 701 - -
Car10g00573 716 MobiDBLite consensus disorder prediction 676 716 - -
Car10g00573 716 MobiDBLite consensus disorder prediction 267 297 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00573 Car12g01220 CCT
Car10g00573 Car11g00491 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00265 Car-Chr2:1803418 Car10g00573 Car-Chr10:2897136 0 dispersed
Car10g00573 Car-Chr10:2897136 Car18g00729 Car-Chr18:8428061 2.62E-163 dispersed
Car10g00638 Car-Chr10:3239659 Car10g00573 Car-Chr10:2897136 7.88E-09 dispersed
Car13g00686 Car-Chr13:8239898 Car10g00573 Car-Chr10:2897136 1.02E-63 dispersed
Car18g00258 Car-Chr18:1492969 Car10g00573 Car-Chr10:2897136 1.10E-61 dispersed
Car04g00723 Car-Chr4:4191548 Car10g00573 Car-Chr10:2897136 6.74E-176 transposed
Car10g00573 Car-Chr10:2897136 Car11g00491 Car-Chr11:2668055 1.06E-169 wgd
Car10g00573 Car-Chr10:2897136 Car12g01220 Car-Chr12:11628396 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89137 PF07714 PK_Tyr_Ser-Thr 9.90E-45 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00573 - - cpep:111779918 1017.68