Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00574 ATGATCGGAGTTTCGATTTCTTCTTCGTCTATCTCCTTCTTCGTCATCTTCGTCCCCATCTTCATCTCCATTTCTGTTTTCCAATTCAACCCCTCATCCGATCACACCGTATTCCAAACCCTAACTCGAAACTACTCACCCAACGATCCATTTACGTCCAAGAACGTCACTGATGGGAACCGAGTCTCGCAGAAGAACTACATTGTTCGCTTCGTCCAATACAGGGAGGCGAAGGAGCATCGATTTTATCTGGAGTCACGTATTAGATCGGGCGGATGGAAATGGATCGAGAGGCGGAACCCTGCGTCCAAGTATCCAACCGATTTCGGCTTGGTATCAATTGAGGACTCGGTGGTAAGGGAGCTGGTTGAGGAGATTGAGGAATTGGAGCTTGTCAAGGATGTGAATGTCGATGCAAGCCACGTCAGGGGTTTGCTAGCGGAGGGTGGGGGTAGAATTGGGGCTTTTGTCGATGGGAAGAAGCGTCCGGGGAAGATTTTCACCTCCATGTCTTTTAACGAAGAAGGTGGGGAACGTTATACCGCAATTAGCAATGCCTCTAATAGATGGGGACGGCATCTGTTGATGCAGAGATCTCAAGTCACCTCATTATTTGGAGCAGACTCTCTTTGGGCAAAGGGGTATACTGGTTCCAAAGTCAAGATGGCTATATTCGATACTGGTATTCGTGCTAATCACCCACATTTTAGGAATATCAAGGAGCGAACAAATTGGACCAATGAAGATACTTTAAATGATAATCTTGGACATGGGACATTTGTTGCTGGTGTCATTGCTGGTGGGGATGAAGAATGTCTAGGGTTTGCTCCAGATACGGAGATATATGCTTTTCGTGTGTTTACAGATGCACAGGTGTCATACACTTCATGGTTCCTCGATGCATTCAACTATGCAATTGCTACCAATATGGATGTATTAAATTTGAGCATTGGTGGACCAGATTACTTAGATCTTCCATTCGTGGAGAAGATTTGGGAAATAACGGCAAATAATATCATCATGGTTTCTGCAATTGGGAATGATGGACCACTTTACGGGACCTTAAACAATCCTGCAGATCAAAGTGATGTCATTGGTGTTGGTGGTATTGACTACAATGATCACATTGCTTCGTTTTCCTCACGTGGCATGACTACTTGGGAGATGCCTCATGGTAATGGTCGTGTGAAGCCAGATGTTGTTGCATATGGTCGGGAAATTATGGGATCAAAAATTAGTACTGGGTGCAAAAGTTTATCAGGCACTAGTGTGGCAAGTCCGGTGGTTGCTGGTGTGGTATGTCTGCTTGTTAGTGTCATCCCTGAAAGCCAGCGGAAGACTATTTTAAATCCAGCTAGCATGAAACAAGCACTTGTTGAGGGAGCTGCAAAGCTTGCTGGTCCTAATATGTACGAGCAAGGTGCTGGCAGAGTTGATCTGTTAGAATCGTATGAAATACTTAAGAGCTACCAACCTCGGGCAAGCATCTTCCCTGGTGTTCTTGACTATACAGATTGCCCTTATACATGGCCCTTTTGTCGCCAACCTCTTTATGCAGGTGCAATGCCTATTATTTTCAATGCTACCATTTTGAATGGAATGGGTGTAATTGGCTATGTTGAAGGTCAACCAACTTGGAATCCTTCGGATGAAGAAGGAAATCTCTTAAGTATTCACTTCACTTATTCTAAGGTTATCTGGCCTTGGACTGGTTACATTGCACTTCATATGCAAATTAAGGAGGAAGGTGCACAGTTTTCTGGAGAAATTGAGGGCAATGTGACTCTAACAGTATATAGTCCTCCATCTAGAGGAGAGAAGAACCGCCGGATTAGTACTTGTGTGCTACAGCTGAAGTTAAAAGTAGTTCCAACACCTCCAAGATCAAAACGAATTTTATGGGATCAATTTCATAACATCAAATATCCTCCTGGTTATATTCCTAGAGATTCCTTGGATGTACGCAATGACATTCTGGACTGGCATGGAGACCACCTGCATACAAATTTTCATATTATGTTTAACATGTTAAGAGATGCTGGATACTATGTTGAAACGCTTGGTTCTCCTCTAACATGCTTTGATGCTCGCCAATATGGGACGCTTTTACTAGTGGATCTTGAAGATGAGTACTTCAAAGAGGAAATTGAAAAGTTGAGGGACGATGTTATGATTACTGGATTGGGGTTGGCTGTGTTTTCTGAATGGTATAATGTAGAAACAATGGTAAAGATGAGGTTTTTCGATGATAACACAAGAAGCTGGTGGACTCCAGTTACTGGAGGTGCAAATATTCCTGCACTAAATGATCTTTTAGCCCCATTTGGTATTGCTTTCGGGGATAAGATTTTGAATGGTGATTTTTCTATTGATGGTGAACAGAGTCGGTATGCATCAGGAACAGATATTGTGAGGTTTCCACGAGGTGGTTATGTGCATAGTTTCCCTTTCATTGATAGCTCAGAGAGTGGGGCGGCTCAGAGCATACTAACATCTAGCCTGAGTAAGGCAGACTTTCCAATTCTTGGCCTATTAGAGGCAGCAGAAGGCCGCATTGCAGTCTATGGAGATTCAAATTGTCTAGATAGCAGCCATATGGTTACAAATTGCTATTGGCTCCTGAGGAAAATATTAGATTTTACCAGTGGAAATATTAGAGATCCGGTGCTATTCACCAAGTTTTCCAAACAAAATTCACCTCTATATCTTGAAGATAACAAACTTCCATCTCGAAGAAGCGATGTAAATTTCTCTTTGTATTCTGCGGTTTCTGGAAAGGAATTGATATGCATGAGTGATTCTAGGTTTGAAGTATGGGGTACCAAGGGATACAGCGTACAGGGCAGGGGAAGGAATAGAAGGCTGCCTGGATTTCCCTTAATTGACTTGGGAAGAGACTTGAATTCTACTCCAGAAAGTTCTTTGATGGGACCTCCCAAGTTGACTTTAAAGGACCGAAGTGATAAATATGGAAACCGATACTTAAGCTTGTTCTACCGGGATGAGCCTGACATGCCTTTGATTGTTCCTAATCATTGGCTTGTTCCTGCTGTAGTTGCAGTCGCAGGGCTGTTGCTTCTTTTGAGTTTTTGGCGAATTAGACAGAAGCGACGACGTCGACGAAGAGGATCGGGATCTGCTGCACGTTTTTCCAATCTCTAG 3162 43.2 MIGVSISSSSISFFVIFVPIFISISVFQFNPSSDHTVFQTLTRNYSPNDPFTSKNVTDGNRVSQKNYIVRFVQYREAKEHRFYLESRIRSGGWKWIERRNPASKYPTDFGLVSIEDSVVRELVEEIEELELVKDVNVDASHVRGLLAEGGGRIGAFVDGKKRPGKIFTSMSFNEEGGERYTAISNASNRWGRHLLMQRSQVTSLFGADSLWAKGYTGSKVKMAIFDTGIRANHPHFRNIKERTNWTNEDTLNDNLGHGTFVAGVIAGGDEECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNMDVLNLSIGGPDYLDLPFVEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYNDHIASFSSRGMTTWEMPHGNGRVKPDVVAYGREIMGSKISTGCKSLSGTSVASPVVAGVVCLLVSVIPESQRKTILNPASMKQALVEGAAKLAGPNMYEQGAGRVDLLESYEILKSYQPRASIFPGVLDYTDCPYTWPFCRQPLYAGAMPIIFNATILNGMGVIGYVEGQPTWNPSDEEGNLLSIHFTYSKVIWPWTGYIALHMQIKEEGAQFSGEIEGNVTLTVYSPPSRGEKNRRISTCVLQLKLKVVPTPPRSKRILWDQFHNIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMFNMLRDAGYYVETLGSPLTCFDARQYGTLLLVDLEDEYFKEEIEKLRDDVMITGLGLAVFSEWYNVETMVKMRFFDDNTRSWWTPVTGGANIPALNDLLAPFGIAFGDKILNGDFSIDGEQSRYASGTDIVRFPRGGYVHSFPFIDSSESGAAQSILTSSLSKADFPILGLLEAAEGRIAVYGDSNCLDSSHMVTNCYWLLRKILDFTSGNIRDPVLFTKFSKQNSPLYLEDNKLPSRRSDVNFSLYSAVSGKELICMSDSRFEVWGTKGYSVQGRGRNRRLPGFPLIDLGRDLNSTPESSLMGPPKLTLKDRSDKYGNRYLSLFYRDEPDMPLIVPNHWLVPAVVAVAGLLLLLSFWRIRQKRRRRRRGSGSAARFSNL 1053
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2899243 2906126 - Carg09850-RA Car10g00574 155476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00574 1053 ProSiteProfiles Serine proteases, subtilase domain profile. 189 487 - -
Car10g00574 1053 Pfam Subtilase family 217 468 IPR000209 GO:0006508|GO:0008236
Car10g00574 1053 ProSitePatterns Serine proteases, subtilase family, serine active site. 421 431 IPR023828 -
Car10g00574 1053 ProSitePatterns Serine proteases, subtilase family, histidine active site. 257 267 IPR022398 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00574 Car-Chr10:2899243 Car20g00658 Car-Chr20:3717241 5.49E-07 dispersed
Car10g00574 Car-Chr10:2899243 Car07g00646 Car-Chr7:3282729 3.82E-07 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00574 K08653 - csv:101222509 1920.98