Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00604 ATGAGCATTTCCGCCATAGCCAAAGACCTTCCAAACACCTTTCAACATCTTCTCCACATGACAACATCTTTTTCTTCTCTGGAAACCATTTCCTTCTTCCTCCTCCTCCTCCTCTGTTCCCACCATGTCAATTCCCACCTCTACGAACAAGAACACTCTGTTCTTCTCCGACTCAACCACTTCTGGCACAACCAACCGCCGCTTCACCATTGGCCGTCCTCCAATGCTTCTCATTGTACATGGCCGGAGGTTCAGTGTACTGACAATTCCGTCACTGCCCTTCTTTTCCATTCCTATAATTTGAACGGAACTTTCCCCCCTTTCATTTGCGACCTCAAAAATCTCACCTTTATTGATTTTCAGTACAATTTCATCACCGGCGGCTTTCCGACCACGCTTTACAATTGCTTGAACCTTAATTACCTCGACCTCTCACAGAATTACTTTGTCGGCTCGATACCCAATGACGTCGATCGCTTGTCTCGTCTCCAGTTTCTTAATCTCGGCGCAAACAACTTCTCCGGTGACATTCCGACAGCCATTTCTCGGCTGTCGGAACTTCGGTACCTTCATCTTTTTATGAATCAATTCAATGGGACTTACCCATCTGAAATCGGCAACTTATCGAATCTGGAAGAGTTGCTGTTGGCTTATAATTCAAATTTGCTACCGGCTGAATTGCCTTCCAGTTTCGCCCAATTGAAGAAATTGACGTTTTTGTGGATGGCAGAATCAAACGTGAACGGTGAAATTCCAGAATGGATCGGAAACTTGACCGCCCTCGAGCGATTGGATTTGTCGAAGAATCATTTGATTGGGGAAATTCCTAGCAGTTTGTTTACATTGAAGAATCTCAGCATCGTTTATCTGTATAAGAACAATCTATCAGGGGAAATTCCTCAGCGGATTGATTCCAAGAAAATCACCGAATACGACCTCTCGGAAAATAATCTGACCGGAAGAATTCCGGCGGCTATCGGCGATCTTCAGGAACTAACGGCTCTGCTTCTGTGTTCAAATCAGTTAAGTGGAGAAATCCCAGAAAGCATCGGTCGTCTTCCATTATTAACAGATGTCAGATTATTCAGCAACAATTTAAACGGTACATTACCGCCAGATTTCGGGCGAAATTCGATCCTCGAAAGTTTTCAGGTGAGTTCAAATAAGCTCACCGGAAGCTTGCCGGAACACCTCTGCTCCGGCGGTAAGCTCAAAGGGGTGATTGCTTACGAAAATAATCTTAGTGGGGAATTACCAGAATCTCTTGGGAGTTGCGATAGCTTGTTCATTATTGATGTTCATAAGAACAACCTCTCCGGGAAAATTCCGGCCGGTTTATGGACGTCTCTGAATTTAACATTTGTAATGATGAACGACAATTCTTTCATGGATGAACTCCCTCGGAGAATCTCCAAGAATCTCGCGAGATTACAAATCAGTAACAACAAATTTTCAGGGAAAATCCCATCGGAGTTATCTTCATTTTGGAATTTGACTGAGATTGAAGCAAGCAATAATCGATTGACAGGACGAATTCCTGAAGAACTCACTGCCCTTTCAAAGATGAACAAGCTTTCGCTCGATGGAAATCAACTCACAGGGGAGCTTCCACGGAACATCATTTCATGGAGATCATTGCACAGCCTTAAACTCAGTCGAAATCGACTCTCTGGTAAAATTCCAGACGAATTTTGCAATTTACCAAGCCTTAATGATCTTGATCTCTCAGAGAATCGACTTTCCGGAACAATTCCGATCGAACTGGGAAATTTGAACTTGAATTTCCTCAACCTCTCTTCAAATTTTCTGTCTGGGAAAATCCCGCCTGCATTTGGAAATGAAATCTATGCAAGAAGCTTTTTGAACAATCCGGGTCTTTGTTTAAATCTGGACGGCTGCAGTTTAAGAACTCAGAATTTGCGAAAGATTTCATCGCAGCATCTTGCTCTGATCGTAAGCTTGGGCGTAATAATATCCATATTCTTTGTAGTTTCTGCTCTGTACATAATCAAAATCTATACAAAAACTGGAATCAAAGCAGATGTTGAATGGAAATTGACATCATTTCAGAGGCTGAATTTCTCGGAGGGTAATCTTTTATCTGGGCTGTCGGAGAACAACGTGATCGGGAGCGGTGGATCCGGGAAAGTTTACCGGATTCCAGTGAATAATCTGGGCGATATGGTGGCCGTGAAGAGAATATGGAACAGCAGAAAGTCAGACTACAAGCTTGAGAAAGAATTCATGGCGGAAGTTGAGATTCTCAGTTCGATTCGACATAACAATATAATCAAACTCCTCTGCTGCGTTTCCTGTGAAAGTTCACGACTGCTCGTTTACGAGTACATGGAGAAGCAAAGCCTGGACAAATGGCTACACAATAAGAACTCACTGCCAAGAATTGCAGGGTCGGGCGCTGTTCGCGGTGTCGCCCTCAATTGGCCGATGAGATTTCAAATTGCAGTGGGGGTAGCACAGGGCCTCTGTTATATGCACCATGAATGCTCCCCGCCGGTAATTCACAGAGACTTGAAGTCCAGCAATATCTTACTAGATTCAGAATTCAATGCCAAAATAGCAGACTTTGGCTTAGCCAAGTTGCTGGTGAAGCAAGGGGAACCAGCTTCAGTCTCCGCTGTCGCGGGCTCCTTCGGATACATGGCTCCAGAGTATGCCCAGATACCGAGAATTAACGAGAAGATCGATGTGTTTAGCTTTGGAGTTATACTTCTAGAGTTGGTGACCGGAAAGGAAGCTCTTACCGACGTTGAAGACTCGTCTCTGGCTATGTGGGCTTGGGAGTTCATTAAACAAGGCAAGGCAATAGTCGAAGCATTGGATGAGGATGTGAAGGAGACACATTATCTTGATGAAATGTGCACCGGACCATGGCACCTCAAAACCATGCAGATCAAAAAGTACAGACTCGCTGAGAGATATGACGATTACTTGAAAGATGTAACCGTCAAGGTTCTCTTCAGTGGTGGAGACTGGAGAGGACCCGGCACTCGAGCCACTGCTCCGAGCACAAATGGCTATGGAGTTGACGGGTCGACACGGTTTGTTTGTAAACTTCGAATAACGATCCCTGTCGTGTATATTTTAGCTGAACCACAATGA 3120 44.36 MSISAIAKDLPNTFQHLLHMTTSFSSLETISFFLLLLLCSHHVNSHLYEQEHSVLLRLNHFWHNQPPLHHWPSSNASHCTWPEVQCTDNSVTALLFHSYNLNGTFPPFICDLKNLTFIDFQYNFITGGFPTTLYNCLNLNYLDLSQNYFVGSIPNDVDRLSRLQFLNLGANNFSGDIPTAISRLSELRYLHLFMNQFNGTYPSEIGNLSNLEELLLAYNSNLLPAELPSSFAQLKKLTFLWMAESNVNGEIPEWIGNLTALERLDLSKNHLIGEIPSSLFTLKNLSIVYLYKNNLSGEIPQRIDSKKITEYDLSENNLTGRIPAAIGDLQELTALLLCSNQLSGEIPESIGRLPLLTDVRLFSNNLNGTLPPDFGRNSILESFQVSSNKLTGSLPEHLCSGGKLKGVIAYENNLSGELPESLGSCDSLFIIDVHKNNLSGKIPAGLWTSLNLTFVMMNDNSFMDELPRRISKNLARLQISNNKFSGKIPSELSSFWNLTEIEASNNRLTGRIPEELTALSKMNKLSLDGNQLTGELPRNIISWRSLHSLKLSRNRLSGKIPDEFCNLPSLNDLDLSENRLSGTIPIELGNLNLNFLNLSSNFLSGKIPPAFGNEIYARSFLNNPGLCLNLDGCSLRTQNLRKISSQHLALIVSLGVIISIFFVVSALYIIKIYTKTGIKADVEWKLTSFQRLNFSEGNLLSGLSENNVIGSGGSGKVYRIPVNNLGDMVAVKRIWNSRKSDYKLEKEFMAEVEILSSIRHNNIIKLLCCVSCESSRLLVYEYMEKQSLDKWLHNKNSLPRIAGSGAVRGVALNWPMRFQIAVGVAQGLCYMHHECSPPVIHRDLKSSNILLDSEFNAKIADFGLAKLLVKQGEPASVSAVAGSFGYMAPEYAQIPRINEKIDVFSFGVILLELVTGKEALTDVEDSSLAMWAWEFIKQGKAIVEALDEDVKETHYLDEMCTGPWHLKTMQIKKYRLAERYDDYLKDVTVKVLFSGGDWRGPGTRATAPSTNGYGVDGSTRFVCKLRITIPVVYILAEPQ 1039
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3080700 3083996 + Carg13041-RA Car10g00604 155506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00604 1039 Pfam Leucine rich repeat 114 173 IPR001611 GO:0005515
Car10g00604 1039 Pfam Leucine rich repeat 544 601 IPR001611 GO:0005515
Car10g00604 1039 ProSiteProfiles Protein kinase domain profile. 703 1022 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car10g00604 1039 ProSitePatterns Serine/Threonine protein kinases active-site signature. 839 851 IPR008271 GO:0004672|GO:0006468
Car10g00604 1039 Pfam Protein kinase domain 705 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car10g00604 1039 ProSitePatterns Protein kinases ATP-binding region signature. 709 732 IPR017441 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00604 Car11g00532 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00604 Car-Chr10:3080700 Car11g01485 Car-Chr11:11993793 5.17E-20 dispersed
Car10g00604 Car-Chr10:3080700 Car11g00532 Car-Chr11:2878304 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89139 PF00069 Pkinase 7.00E-47 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00604 - - csv:101214935 1489.94