Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00607 ATGGGGAGGGCGACAAGATGGTTCAAGAACTTCTTTGGGATTAAGAGAGACAAAGAAAATTCCAACCAAACAAAACCCACTTCCAATTCCGCCGCCGACAACGATCTCTGCAATAATCCCGCTACAGTACCGCCGTATTTATCAGCGGCAGAGGCGGCGTGGTTGAAATCCTTCTACTCTGAAACAGATAAAGAACAGAGCAAGCATGCAATAGCAGTGGCTGCAGCCACTGCTGCAGCAGCCGACGCGGCGGTTGCTGCAGCACAAGCTGCGGTGGCTGTAGTCCGCTTGACTAGCCATGGTAGAGGTACTATGTTTGGCGGCGGCCGGGAAAGATGGGCCTCTGTAAAGATTCAAACTTGCTTCAGAGGGTATCTGGCGAGGAAAGCACTGAGAGCACTGAAAGGTCTGGTGAAATTACAGGCGGTTGTTAGGGGATATTTTGTTCGTAAACAAGCAACAGCTACTCTTCTCAGTATGCAAGCTTTAATCAGAGCTCAAGCCACCGTTCGGTCTCAGAGAACTCGCAGACTTGAAATCCGAGCCCGCAAGAACACGGAGAGATTTGACGATACGAAGAGCGAACACACTGCTTCAGTTCATAGCAGACGGCTCTCTGCTTCATTAGACAACATGATATTTACAGCGCTGGAAGAAAGCCCCAAAATCGTGGAAATGGACACTAGCCGACCCAAATCCATGTCTCGTCGGACGAACACGTCGTTGTCGGAATTGGGTGACGACCCATTTAACCAACCATTGTCGTCTCCACTTCCTTGTCGGACTCCGTCACGTTTGCAGATCCCAGATGGTCGGAATTTGCACGATTCCGACTGGGGTTTTGTGGCTGACGAATGCCGTTTAATCTCGACGGCGCAGAGTACTCCACGATTTGTCAGCTGTGGTGGTTCCAATGGTGGTCCTCCGACGCCGGCGAAGAGTATGTGCGGCGATAATTTCTTCAGAGGGTACTTGAATTTCCCAAATTACATGGCGAATACTCAATCGTTTAAAGCGAAATTGAGGTCTCAAAGTGCTCCAAAACAGAGGCCAGAGCCGGGATCGAAGAAAAGAGTCTCGTTGAACGACTTAATGGAATCAAGAAGCAGCCTTAGTGGGGTTCGAATGCAGAGTTCTTGCTCCCAAGTTCAAGACGCCATTAATTTCAAGAACGCAGTGATGAGCAAACTCGACCGGCCATCGGAATTCAACAACTTGCAGAGAAAAACATGA 1233 49.47 MGRATRWFKNFFGIKRDKENSNQTKPTSNSAADNDLCNNPATVPPYLSAAEAAWLKSFYSETDKEQSKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRGTMFGGGRERWASVKIQTCFRGYLARKALRALKGLVKLQAVVRGYFVRKQATATLLSMQALIRAQATVRSQRTRRLEIRARKNTERFDDTKSEHTASVHSRRLSASLDNMIFTALEESPKIVEMDTSRPKSMSRRTNTSLSELGDDPFNQPLSSPLPCRTPSRLQIPDGRNLHDSDWGFVADECRLISTAQSTPRFVSCGGSNGGPPTPAKSMCGDNFFRGYLNFPNYMANTQSFKAKLRSQSAPKQRPEPGSKKRVSLNDLMESRSSLSGVRMQSSCSQVQDAINFKNAVMSKLDRPSEFNNLQRKT 410
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3093336 3094718 + Carg13038-RA Car10g00607 155509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00607 410 MobiDBLite consensus disorder prediction 225 259 - -
Car10g00607 410 ProSiteProfiles IQ motif profile. 135 162 IPR000048 GO:0005515
Car10g00607 410 Pfam IQ calmodulin-binding motif 138 152 IPR000048 GO:0005515
Car10g00607 410 Pfam IQ calmodulin-binding motif 112 132 IPR000048 GO:0005515
Car10g00607 410 ProSiteProfiles IQ motif profile. 111 139 IPR000048 GO:0005515
Car10g00607 410 MobiDBLite consensus disorder prediction 233 259 - -
Car10g00607 410 Pfam Protein of unknown function (DUF4005) 296 376 IPR025064 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00607 Car11g00535 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01240 Car-Chr2:8388162 Car10g00607 Car-Chr10:3093336 6.78E-35 dispersed
Car10g00607 Car-Chr10:3093336 Car14g01570 Car-Chr14:12821341 9.58E-37 dispersed
Car01g00077 Car-Chr1:426983 Car10g00607 Car-Chr10:3093336 7.22E-71 wgd
Car10g00607 Car-Chr10:3093336 Car11g00535 Car-Chr11:2896851 0 wgd
Car10g00607 Car-Chr10:3093336 Car14g01140 Car-Chr14:10044241 6.53E-82 wgd
Car10g00607 Car-Chr10:3093336 Car17g00704 Car-Chr17:6456875 8.03E-107 wgd
Car10g00607 Car-Chr10:3093336 Car08g00629 Car-Chr8:4031350 1.03E-118 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00607 - - csv:101215651 615.15