Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car10g00608 | ATGTCGAGACTGCAGCGGCCTCCTCCTCCTCCTCTTCTTGTTCTTGTTCTTTTGCTGAGCCAGAGTCTCACCCTAACGCACTGCCATACCAAGGGGCTCAATCCCAGGAGCTCGCCCAAGACTGCTCTTCCCGATAATTCGACCACAACCCAATTCTCAGAGCAGCAATTTATGAAATGGGTCAAATTTGTCGGCAGTCTCCGACACTCTGTTTTTAGAACGGCGAAGAACAACCTTTTTCCTTCTTATACTCTCCATGTGGCTAAGAATCCGGCTGTCGGGGACTTCACGTCGATCCAAGACGCCGTCGATTCCCTCCCTTCAATCAATTTGGTCAGAGTCGTCATCAAGGTTCATGAAGGTGTATACACAGAGAAGGTGAACATACCCCCGTTGAAATCATTCATAACAATCCAAGGAGCAGGGGCTGACAAAACGATTGTTCAATGGGGAGACACCGCACAATCACCAGGCCCAAAGGGGCAGCCAATGGGGACTTACAACTCCGCAACATTCGCAGTAAATTCCCCTTATTTCATAGCCAAAAACATCACATTCAAGAACACCACCCCTGTTCCAGCACCAGGGGCAATCGGGAAGCAGGCAGTGGCGTTCAGAATCTCGGCGGACACAGCAGCATTCTACGGGTGCAGATTCTTGGGAGCTCAAGACACACTATACGACCATTTGGGTCGGCATTATTACAAGGATTGTTACATAGAAGGGTCGGTGGACTTCATATTCGGAAACGGGCTGTCTCTGTTCGAGGGATGTCACGTGCACGCAATAGCGCAGAACGCAGGAGCGTTGACAGCGCAGGGGAGAAGCAGCCTGCTGGAGGACACAGGGTTCTCGTTCGTAAACTGTAAGGTCACGGGGTCTGGAGCGCTATACTTAGGGAGGGCATGGGGGCCCTTCTCTAGGGTCGTCTTCGCTTACACCTATATGGACAACATTATTCTCCCCAAAGGCTGGTACAACTGGGGCGATCCCAGCCGCGAAATGACGGTGTTTTATGGGCAATACAAATGTACAGGCGAAGGAGCTAGCTTTGCCGGCAGAGTTTCATGGTCGAGAGAGCTCACTGATGAAGAAGCCAAGCCCTTCATTTCCCTCACCTTCATTGATGGCTCTGAATGGATCAAAATCTAA | 1152 | 50.87 | MSRLQRPPPPPLLVLVLLLSQSLTLTHCHTKGLNPRSSPKTALPDNSTTTQFSEQQFMKWVKFVGSLRHSVFRTAKNNLFPSYTLHVAKNPAVGDFTSIQDAVDSLPSINLVRVVIKVHEGVYTEKVNIPPLKSFITIQGAGADKTIVQWGDTAQSPGPKGQPMGTYNSATFAVNSPYFIAKNITFKNTTPVPAPGAIGKQAVAFRISADTAAFYGCRFLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNGLSLFEGCHVHAIAQNAGALTAQGRSSLLEDTGFSFVNCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIILPKGWYNWGDPSREMTVFYGQYKCTGEGASFAGRVSWSRELTDEEAKPFISLTFIDGSEWIKI | 383 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 3096296 | 3098001 | - | Carg13037-RA | Car10g00608 | 155510 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car10g00608 | 383 | ProSitePatterns | Pectinesterase signature 2. | 240 | 249 | IPR033131 | - | |
| Car10g00608 | 383 | Pfam | Pectinesterase | 92 | 377 | IPR000070 | GO:0030599|GO:0042545 |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Car10g00608 | Car11g00536 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car02g00256 | Car-Chr2:1743719 | Car10g00608 | Car-Chr10:3096296 | 3.58E-79 | dispersed | |
| Car02g01302 | Car-Chr2:8667745 | Car10g00608 | Car-Chr10:3096296 | 1.65E-104 | dispersed | |
| Car04g00715 | Car-Chr4:4134068 | Car10g00608 | Car-Chr10:3096296 | 7.56E-170 | dispersed | |
| Car10g00608 | Car-Chr10:3096296 | Car15g01027 | Car-Chr15:8018790 | 5.26E-107 | dispersed | |
| Car01g00252 | Car-Chr1:1406330 | Car10g00608 | Car-Chr10:3096296 | 8.47E-11 | transposed | |
| Car09g00908 | Car-Chr9:5602260 | Car10g00608 | Car-Chr10:3096296 | 5.05E-46 | transposed | |
| Car14g01398 | Car-Chr14:11798268 | Car10g00608 | Car-Chr10:3096296 | 5.75E-78 | transposed | |
| Car15g00254 | Car-Chr15:1395372 | Car10g00608 | Car-Chr10:3096296 | 1.20E-87 | transposed | |
| Car16g00445 | Car-Chr16:2820554 | Car10g00608 | Car-Chr10:3096296 | 2.30E-99 | transposed | |
| Car10g00739 | Car-Chr10:3889297 | Car10g00608 | Car-Chr10:3096296 | 2.52E-90 | transposed | |
| Car10g00608 | Car-Chr10:3096296 | Car11g00536 | Car-Chr11:2899346 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car10g00608 | K01051 | - | csv:101215894 | 695.656 |