Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00640 TCCTTCTTCCCCCCTTCAACCCACTCGGAGTCGGAGGCCACCGCCACCGCCACCGCGCCGGGCCGGCCACCTTTCTTCTTCTGTGCTGTCTCTGCAATGAGGTTACCGTTCTCTGCGAGTCTTGTCCTCTTGTTCTTCGTTCACCTTCTTCTCTACTTCGCTACTTTCCCTTCCCTTTCCATTTCTCTCTTAACCGTCACTACATCCGAGTTGGTGGCCGGCGAGATCAATGCTACTGCCGACTCTAACTTCTCGAGATCTGCTAATGTTGACGATAGTTTCGCTAATATAATCGATCGGGCTCTCGAGAGGGAATTTACTGAGAATGAGCAGAGTGATGAAGTCACGGATGCTGGTAGCTTCAACAACAGTGTTGCTGAGAAGCAGGCAGTTTTGGAAACTGTTGCCAGAGTTAAGTCAAAGAAGAATGAATCGAAAGAGGAGAAATCATTTCAGTTCCATGATGTCTTCCATTTAGATAATGAGAATCGAGGAGAAGACATGCCTACATTAATTGATAGAAAGGACAATGTCTTTATTATATCCAATCCAAAGTCGAAGTTTCCCATGCTCCAATTGGATTTAAGATTGATTTCAGATCTAGTTGTTGTTATTGTTTCTGCGACTTGTGGTGGCATTGCTTTTGCATGTGCAGGGCAACCGGTCTTCACTGGATACCTGTTGGCTGGATCTCTCATTGGACCGGGAGGTTTAAGCTGTGTCAGTGAAATGGTGCAAGTTGAGACAGTTGCTCAGTTTGGTGTGATCTTCCTTCTTTTTGCATTGGGCTTGGAATTCTCCACTGCAAAACTTCGTGTTGTTCGAGCAGTAGCTATTGTTGGAGGATTGCTCCAGATTTTCCTTTTTATGTGTTTGTGTGGAATTACAGCTTCGCTATGTGGTGGTAAATCTTCAGAGGGGGTATTTGTTGGTGCATTCCTGTCTATGTCTTCGACTGCAGTGGTCTTGAAATTTTTAATGGAACGAAATAGCGTCAATGCCATTCATGGTCAGGTGACCATTGGTACGCTTATTCTTCAGGATTGTGCTGTAGGCTTGCTGTTTGCCCTGCTTCCGATTCTTGGTGGTACTTCTGGTGTTCTTCAAGGAGTTCTGTCCATGACTAAGTCGTTGGTGGTCTTGATTACGTTTTTGATTACTTTGACAATATTATCTCGCACATGTGTTCCGAGGTTCCTTAAACTTATGATTAGCCTGTCATCTCAGACTAATGAACTCTATCAATTGGCGGCTGTTGCATTCTGCTTACTTGTAGCTTGGTGCAGTGATAAACTTGGGTTAAGCCTTGAATTAGGTTCCTTTGCTGCGGGTGTGATGATATCAACTACGGATCTTGCTCAGCACACACTTGAGCAGGTTGAGCCCATTCGCAACTTCTTTGCTGCTCTTTTTCTTGCCAGCATTGGGATGCTAATTCATGTTCATTTCCTATGGAACCACATTGATATCTTACTTGCGGCTGTAATATTGGTCATTGTTATAAAAACTGTAGTGGTTACTGCTGTTGTCAAGGGATTTGGATACAGCAACAAAACTTCACTTCTGGTCGGGATGTCACTTGCACAAATTGGGGAATTTGCTTTTGTCCTTCTAAGCCGTGCCTCTAATCTTCATCTTGTTGAGGGAAAATTGTATATACTGCTGCTTGGCACAACTGCACTTAGTCTGGTGACTACCCCATTGCTTTTCAAGCTTATTCCTGCTGTGGTGCGTATTGGAGTATTGTTGCGGTGGTTCTCACCTGATGGTTTGAGTGAGATTGGATTCAAAGGAGACGGCCTTCGAACAGATGGTGCTAAACGCATTACTTTGGTGGTTCAAGGCTCTCATTTTTCATGA 1860 44.41 SFFPPSTHSESEATATATAPGRPPFFFCAVSAMRLPFSASLVLLFFVHLLLYFATFPSLSISLLTVTTSELVAGEINATADSNFSRSANVDDSFANIIDRALEREFTENEQSDEVTDAGSFNNSVAEKQAVLETVARVKSKKNESKEEKSFQFHDVFHLDNENRGEDMPTLIDRKDNVFIISNPKSKFPMLQLDLRLISDLVVVIVSATCGGIAFACAGQPVFTGYLLAGSLIGPGGLSCVSEMVQVETVAQFGVIFLLFALGLEFSTAKLRVVRAVAIVGGLLQIFLFMCLCGITASLCGGKSSEGVFVGAFLSMSSTAVVLKFLMERNSVNAIHGQVTIGTLILQDCAVGLLFALLPILGGTSGVLQGVLSMTKSLVVLITFLITLTILSRTCVPRFLKLMISLSSQTNELYQLAAVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLAQHTLEQVEPIRNFFAALFLASIGMLIHVHFLWNHIDILLAAVILVIVIKTVVVTAVVKGFGYSNKTSLLVGMSLAQIGEFAFVLLSRASNLHLVEGKLYILLLGTTALSLVTTPLLFKLIPAVVRIGVLLRWFSPDGLSEIGFKGDGLRTDGAKRITLVVQGSHFS 619
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3253249 3263704 - Carg13005-RA Car10g00640 155542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00640 619 Pfam Sodium/hydrogen exchanger family 202 571 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00640 Car12g00585 CCT
Car10g00640 Car11g00567 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00640 Car-Chr10:3253249 Car18g01106 Car-Chr18:11067665 0 dispersed
Car10g00640 Car-Chr10:3253249 Car11g00567 Car-Chr11:3058523 0 wgd
Car10g00640 Car-Chr10:3253249 Car12g00584 Car-Chr12:3897326 4.06E-18 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00640 - - csv:101208614 988.793