Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00648 ATGGAGGCTCTTCTTCCGCTGCTGATTCTTTGTGTCGTTGCTGCTAATGCGTCCGACCTTCGGGAAATCGCAGCTTCACTCGGTGCTCCTACCGTGTCGCCGCCGGTTAATAGCATGCCTCAGCCGCCTTCACCAGTTCAACCCAGTTCCCGGCGTGACCAAACAAGCAATTCATCACCGAATGTAGCTCCAATCCCTGACCCAATTTCTCCAGAGCCTTATATCTCTCCAGTAGTTGCTATTTCGCCCAAAGCTGATGACATAAAGAGCTTAGAAGCACCAGTAGCTACACCTTCTAATGCATTGCCTAAGTATGTGCTACCTGTGAATCATTCCCCAAAGGAAGCTCCTTCTACTCGCAATGACATGGGACGTTCTCGTGACACTCAACCGCCGATCGTTCCACCGCGAAAAGCTCCGTTTCGTAGAGGAAATCTTTCTCCAACATCTCCTGTGCCTTCAAATTATAAGCATCATAGAAGGAGGAATCATATCATTAGTCACACACCTGCACCTGCACCTGCACCGTCATATCCGATTTCGTCTCGTGCGATAGAAACGTCAGGACCAGTTGTTTCCACGGCACAACATTCACACGAGAGAGGAGACTACGCTCCACCTATGGAGTCAGATCCTTCGTCGATAGCTCCTTCACATTATGATCGTCCACCGCTTGTGACTCATGTTTCGCCTTCTCCTTCACCATACCAGAAAATGTCTGGTCATACTGAAAGACATTTTTATCCCCCTAAAGCTTCACCCTCACCCTTGAAACCTTGGGCAAAAAGCCCGAAGATGCCACCGCTGCGACCGATACATACATTGCCTCCTCCACCTCCCAATGAAGATTGTTCGGCTACCCTGTGCACCGAGCCATATACAAACACTCCCCCAGGATCTCCCTGCGGTTGTGTTTGGCCCATGCAAATTGGACTTCGCCTCAGCGTTTCGCTATATACGTTCTTCCCCCTGGTTTCGGAGCTGGCAGCAGAAATCGCTGCTGGGGTGTTCGTAAAGCAAAGCCAAGTACGCGTCATTGGAGCTAATGCAGCTAACCAGCAACCAGATAAGACTGTTGTTCTTATTGACTTAGTCCCACTTGGGGAAAAATTTGACAATACTACAGCCTTTTTGACTTACCAAAGGTTTTGGCATAAGAAAGTTTCTGTCAAAGCTTCCTATTTTGGGAAATATGAAGTATTATACGTTCGATATCCGGGTTTACCTCAATCACCTCCTTCTGGAGATTCAGGAATAGATAATGAGCCTTATTATAGTAATAGTAACGATGCGAGGACGGTTAAACCGATTGGCGTCGATGTACAGAACATACAGCACAAAGACAGGATAAGTGGTGGTATGATTGCCATTATTGCTCTATCAACTACTGTTGCAGTCGTCTTATGTGTTGCGACTGCTTGGATTTTGCTCCTCAGACGCAACGATGGCGTTTGTCAGCCGAAACCAACTCCACATGCTTTGGTATCTTCCCTCAATAAACCATCAGGTGCTGGTGGATCAGTCATGGCAGCCATGCCTAGTTCTGCTTCTTTATCCTTTGGATCTAGCATTGCCCCATATTCAGGATCAGCCAAGACATTCAGTGCCTCAGACATAGAGAGAGCCACCAATAATTTTGACCCTTCAAGGATATTAGGGGAGGGTGGCTTTGGACGTGTTTACAGAGGCACTCTCGAAGACGGTACCGAAGTAGCAGTTAAAGTTCTCAAGAGAGATGATCACCAGGGCGGTCGAGAATTCTTGGCTGAAGTTGAAATGCTTAGCCGTCTTCACCATAGAAACTTGGTCAAGTTGATTGGAATATGTACTGAGGAGGGTAGCCGCTCCCTGGTGTATGAACTTATTCCAAATGGCAGTGTGGAATCTCACTTACATGATGTTGATAAGGAAACTGCCCCACTTGATTGGGACGCTCGGATGAAGATAGCACTTGGCGCTGCTCGGGGTTTATCCTATCTACACGAGGATTCGAGTCCGAGAGTCATACATCGAGACTTCAAATCCAGCAATATCTTATTAGAACATGATTTTACACCAAAAGTTTCGGACTTTGGCTTGGCTAGAACGGCAATGGATGAGGAAAGCAGACACATTTCGACACGCGTCATGGGAACTTTCGGATATGTGGCTCCGGAATATGCGATGACGGGGCATTTACTTGTGAAGAGTGATGTTTATAGCTACGGAGTCGTTCTTCTTGAGCTATTAACAGGGAGGAAACCGGTTGACATGTCGCAACCGCCTGGTGAAGAAAATCTTGTTGCTTGGGCTCGTCCACTACTCACGAGCAAAGAAGGTCTAGATGTTATAATTGACAAATCGCTTGATTCTAGTGTTCCTTTTGAAAATATTGCCAAAGTGGCTGCCATTGCTTCAATGTGTGTGCAACCAGAGGTGTCACATCGACCTTTCATGGGCGAGGTCGTTCAAGCTTTGAAACTAGTATGCAACCAATGCAATGATGCTCGAGAAGCAATCTCACAAGCTGGTTCAAGCCTAGATAATTCGTCTGTGGAGATGAATGACGAGACATTGAGTTCAAGATACATGCTAGACTCTTTTCATAGCGAATATTTAGCATCTGGCTCAATTTCGGGTCTTGATGCCATCGATACATGTCTCTCAATCTCGGGTATGTTAAATTCTTCAATTGGAATCGGAATGCTAGAATCTAGATCACTCGAAAGATGCTTAAGTTCTAGTCCTCTTCGAAACGGGAAAGGTAAGAGGCACTTCTGGCAAAGAATGAGAAGATACTCTGGAAGTAGCATCAGTGAACATGGAATGCCTAGATTATGGTCCGGTTCTACCTAA 2835 46.31 MEALLPLLILCVVAANASDLREIAASLGAPTVSPPVNSMPQPPSPVQPSSRRDQTSNSSPNVAPIPDPISPEPYISPVVAISPKADDIKSLEAPVATPSNALPKYVLPVNHSPKEAPSTRNDMGRSRDTQPPIVPPRKAPFRRGNLSPTSPVPSNYKHHRRRNHIISHTPAPAPAPSYPISSRAIETSGPVVSTAQHSHERGDYAPPMESDPSSIAPSHYDRPPLVTHVSPSPSPYQKMSGHTERHFYPPKASPSPLKPWAKSPKMPPLRPIHTLPPPPPNEDCSATLCTEPYTNTPPGSPCGCVWPMQIGLRLSVSLYTFFPLVSELAAEIAAGVFVKQSQVRVIGANAANQQPDKTVVLIDLVPLGEKFDNTTAFLTYQRFWHKKVSVKASYFGKYEVLYVRYPGLPQSPPSGDSGIDNEPYYSNSNDARTVKPIGVDVQNIQHKDRISGGMIAIIALSTTVAVVLCVATAWILLLRRNDGVCQPKPTPHALVSSLNKPSGAGGSVMAAMPSSASLSFGSSIAPYSGSAKTFSASDIERATNNFDPSRILGEGGFGRVYRGTLEDGTEVAVKVLKRDDHQGGREFLAEVEMLSRLHHRNLVKLIGICTEEGSRSLVYELIPNGSVESHLHDVDKETAPLDWDARMKIALGAARGLSYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGEENLVAWARPLLTSKEGLDVIIDKSLDSSVPFENIAKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNQCNDAREAISQAGSSLDNSSVEMNDETLSSRYMLDSFHSEYLASGSISGLDAIDTCLSISGMLNSSIGIGMLESRSLERCLSSSPLRNGKGKRHFWQRMRRYSGSSISEHGMPRLWSGST 944
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3304194 3308946 - Carg12996-RA Car10g00648 155550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00648 944 MobiDBLite consensus disorder prediction 187 263 - -
Car10g00648 944 Pfam Protein tyrosine and serine/threonine kinase 550 819 IPR001245 GO:0004672|GO:0006468
Car10g00648 944 MobiDBLite consensus disorder prediction 104 158 - -
Car10g00648 944 MobiDBLite consensus disorder prediction 48 63 - -
Car10g00648 944 ProSitePatterns Protein kinases ATP-binding region signature. 552 574 IPR017441 GO:0005524
Car10g00648 944 ProSitePatterns Serine/Threonine protein kinases active-site signature. 668 680 IPR008271 GO:0004672|GO:0006468
Car10g00648 944 MobiDBLite consensus disorder prediction 30 70 - -
Car10g00648 944 ProSiteProfiles Protein kinase domain profile. 546 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00648 Car11g00576 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00255 Car-Chr1:1418880 Car10g00648 Car-Chr10:3304194 5.27E-124 dispersed
Car02g01462 Car-Chr2:9546796 Car10g00648 Car-Chr10:3304194 5.01E-14 dispersed
Car10g00648 Car-Chr10:3304194 Car14g00853 Car-Chr14:5024085 1.19E-124 dispersed
Car20g00293 Car-Chr20:1696588 Car10g00648 Car-Chr10:3304194 1.49E-40 dispersed
Car10g00648 Car-Chr10:3304194 Car11g00576 Car-Chr11:3122182 7.97E-08 wgd
Car10g00648 Car-Chr10:3304194 Car17g00679 Car-Chr17:6274437 6.23E-17 wgd
Car10g00648 Car-Chr10:3304194 Car08g00653 Car-Chr8:4206690 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89141 PF07714 PK_Tyr_Ser-Thr 6.30E-50 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00648 - - cpep:111780726 1784.62