Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00664 ATGGAGGATCATCGGAAGGTTGAAGCCGAGGAAGAAGACGAAGTGGGAACCGCCGCCGTGGAGGAGGAGGAGGAGGAGGAGGAAGAAGAAATCGGAGTTGTGGGTTCGAGCTTGACTCTGGAGAAGGTGGCTGCAGCCAAACAGTTCATTGAGAATCATTACAAGGCTCAAAAAAAGCACATTCAAGAACGCAAAGAGAGGCGTTCGGTGCTCGAAAAGAAGTTGGCATCTTTAGATGTCTCAGAAGAAGAACAAATTAATCTATTGAAAGATTTGGAGCTCAAGGAGACTCAATACATGAGGCTGAAAAGGCATAAAATTTGTGTCGAGGATTTCGACCTTTTGACGATTATTGGTCGAGGTGCTTTCGGGGAGGTCAGACTATGTCGGGAGAAGAAAACAGGCAACATCTATGCCATGAAGAAGCTGAAGAAATCAGAAATGCTCAGCAGAGGACAGGTTGAACATGTCAGAGCTGAAAGGAATTTACTTGCAGAAGTTGCAAGTCACTGCATTGTGAAACTCTATTATTCCTTTCAAGATGCTGAATACTTGTATCTTATCATGGAGTATCTTCCAGGAGGTGACATGATGACTTTACTGATAAGGGAGGAAACTTTGACAGAAACCGTGGCTAGATTTTACGTCGCCCAAACTGTTTTGGCTATAGAGTCGATTCATAAACATAACTACATCCACAGAGATATAAAACCTGATAACCTTCTATTGGACAAAAGGGGTCATATGAAACTCTCTGATTTTGGTCTTTGCAAGCCTCTTGACTGCACAAATCTATCTTCTATAAATGAAAATGAAGTCCTTGACGACGAAAACTTGCCTGACACGGTGGACGTGGACGAGAGCTTTCCAGATAAGAAAAGCGGGAGGCGTTGGAAGAGCCCCCTCGAACAACTTCAGCACTGGCAGATTAACAGAAGGAAACTGGCGTTTTCCACGGTTGGCACTCCAGATTACATAGCTCCAGAAGTGCTGCTAAAAAAAGGATACGGTGTGGAATGTGACTGGTGGTCTCTTGGTGCAATAACGTACGAAATGCTTGTCGGTTATCCGCCATTTTATTCTGATGATCCAATAACAACATGCCGAAAGATTGTGCATTGGAAAAATCACTTAAAATTCCCTGATGAGTCAAGATTATCACCTGAAGCAAAAGACATGATCAGCAGGCTGCTTTGCAATGCTGAGCATAGGCTTGGTACTGGAGGCGCAGAACAAATCAAGGCTCATCCTTGGTTTAAACATACCGAGTGGGACAAACTCTATGACATCGATGCAGCATTTAAGCCCGAGGTCAACGACGAACTCGATACGCAGAATTTTATGCAGTTTGATGAGGTCGATCCACCGCCAACTAGAACCGGATCTGGACCAATAAGGAAGATGTTGTTGACTCCCAAAGATCTCAGTTTTGTTGGTTATACATACAAAAATTTTGAAGCTGTCAAAGGACTGCACCATTCATTTGAGCTAGACACCGGGTGGTATGTCAGTGAAGATGCTGGGCCCCAAGGAGGGTGGATTGTGAGATCCCACGTCGGTTGGAGAGGGAAACGAAGCATTCCTTATAAGGAGCCAGACACTGGGCAGTATGCCAGCGAGGACGTTGGGCCTCCAATGAAGGTGGATTGTAAGATCCCACATCGGGGAAAGCCTTTAAGGGAAAGTCCAAAAAGAGCAATATCTATTGGTGGTGGGCTTGAGCTGTTACAAATAGTATCAGAGCCAGACACTAGGCAGTATGCCAGAGAAGATGCTGGCCCCAATGGGAGTAGATTGTGA 1800 45.06 MEDHRKVEAEEEDEVGTAAVEEEEEEEEEEIGVVGSSLTLEKVAAAKQFIENHYKAQKKHIQERKERRSVLEKKLASLDVSEEEQINLLKDLELKETQYMRLKRHKICVEDFDLLTIIGRGAFGEVRLCREKKTGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDMMTLLIREETLTETVARFYVAQTVLAIESIHKHNYIHRDIKPDNLLLDKRGHMKLSDFGLCKPLDCTNLSSINENEVLDDENLPDTVDVDESFPDKKSGRRWKSPLEQLQHWQINRRKLAFSTVGTPDYIAPEVLLKKGYGVECDWWSLGAITYEMLVGYPPFYSDDPITTCRKIVHWKNHLKFPDESRLSPEAKDMISRLLCNAEHRLGTGGAEQIKAHPWFKHTEWDKLYDIDAAFKPEVNDELDTQNFMQFDEVDPPPTRTGSGPIRKMLLTPKDLSFVGYTYKNFEAVKGLHHSFELDTGWYVSEDAGPQGGWIVRSHVGWRGKRSIPYKEPDTGQYASEDVGPPMKVDCKIPHRGKPLRESPKRAISIGGGLELLQIVSEPDTRQYAREDAGPNGSRL 599
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3399497 3408325 + Carg12981-RA Car10g00664 155566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00664 599 MobiDBLite consensus disorder prediction 14 32 - -
Car10g00664 599 MobiDBLite consensus disorder prediction 1 32 - -
Car10g00664 599 Pfam Protein kinase C terminal domain 438 482 IPR017892 GO:0004674|GO:0005524|GO:0006468
Car10g00664 599 ProSitePatterns Protein kinases ATP-binding region signature. 118 141 IPR017441 GO:0005524
Car10g00664 599 ProSiteProfiles Protein kinase domain profile. 112 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car10g00664 599 ProSiteProfiles AGC-kinase C-terminal domain profile. 420 492 IPR000961 GO:0004674|GO:0005524|GO:0006468
Car10g00664 599 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Car10g00664 599 Pfam Protein kinase domain 312 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car10g00664 599 Pfam Protein kinase domain 114 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00664 Car11g00590 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00664 Car-Chr10:3399497 Car17g00140 Car-Chr17:866008 0 dispersed
Car01g01334 Car-Chr1:11873160 Car10g00664 Car-Chr10:3399497 0 wgd
Car10g00664 Car-Chr10:3399497 Car11g00590 Car-Chr11:3197413 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89142 PF00069 Pkinase 1.10E-43 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00664 K08790 - csv:101208238 883.248