Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00666 ATGAGGAAGGGAGGCTTCAGCAACAACCTCAACCTCAAGCTCAATCTCCCTCAAGATGACCAATCCATAGCGAAGTTCCTAACGCAGAGCGGCACGTTTAAGGATGGCGATCTGCTCGTAAACAGAGATGGGGTTCGGATTGTTTCCAAGAGTGAAGTTGAAGCACCACCTCCGATTAAGCCTACAGATGATCAGCTGAGTTTAGCGGACATAGACATAATTAAAGTCATTGGAAAAGGAAATGGTGGAACCGTGCAATTAGTTCAGCACAAATGGACTGCTCAGTTTTTTGCATTGAAGGTAATTCAGATGAAAATTGAGGAGTCTCACCGCAAGCAGATTGCACAAGAATTGAAAATCAATCAATCAGCGCAGTGCCCTTATATAGTTGTCTGTTACCAATCTTTCTATGATAATGGCTCTATATATATCATCCTAGAGTACATGGATGGAGGTTCTTTAGCAGATTTCTTGAAAAAGGTTAAACAAGTTCAAGAACCATATCTTGCTGCCCTTTGTAAGCAGGTGCTGAAGGGGTTGTCATACCTTCACCATGAACGACACATCATTCATCGGGACTTAAAGCCTTCTAATTTATTAATAAATCATAGAGGGGAAGTCAAGATTACCGACTTCGGTGTCAGTGCGATTATGGCAAGCACATATGGAGAGGCTAATACTTTTGTTGGCACGTATAACTATATGTCTCCAGAGAGAATTATTGGAGAAAAATATGATAATAAAAGTGACATTTGGAGCTTGGGCCTGATATTTCTCGAGTGTGCAACCGGAAAATTTCCTTATTCCCCACCAGAGCAAGAGGGAGGATGGGTTAATTTTTATGAGCTTATGGAAGCCATTGTTGAGGGCGAACCTCCTTCTGCTCCGGCTGACCAATTTACTCCCAATTTCTGTTCGTTCATTTCTGCATGTGTGCAAAAGGACCCAAGGGATAGACTGTCAGCACGTGAACTTTTGGAACATCCTTTCATCAAGATGTATGAAGATACAGATATTGACCTGTCATCTTACTTCAATGATGCAGGGTCTCCACTTGCAACTTTCTAA 1068 41.95 MRKGGFSNNLNLKLNLPQDDQSIAKFLTQSGTFKDGDLLVNRDGVRIVSKSEVEAPPPIKPTDDQLSLADIDIIKVIGKGNGGTVQLVQHKWTAQFFALKVIQMKIEESHRKQIAQELKINQSAQCPYIVVCYQSFYDNGSIYIILEYMDGGSLADFLKKVKQVQEPYLAALCKQVLKGLSYLHHERHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTYGEANTFVGTYNYMSPERIIGEKYDNKSDIWSLGLIFLECATGKFPYSPPEQEGGWVNFYELMEAIVEGEPPSAPADQFTPNFCSFISACVQKDPRDRLSARELLEHPFIKMYEDTDIDLSSYFNDAGSPLATF 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3423175 3427725 - Carg12979-RA Car10g00666 155568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00666 355 CDD PKc_MAPKK_plant_like 69 335 - -
Car10g00666 355 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Car10g00666 355 Gene3D Transferase(Phosphotransferase) domain 1 151 351 - -
Car10g00666 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Car10g00666 355 PANTHER MAP KINASE KINASE 9 354 - -
Car10g00666 355 ProSiteProfiles Protein kinase domain profile. 71 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car10g00666 355 Pfam Protein kinase domain 73 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car10g00666 355 SUPERFAMILY Protein kinase-like (PK-like) 56 337 IPR011009 -
Car10g00666 355 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 9 354 - -
Car10g00666 355 Gene3D Phosphorylase Kinase; domain 1 47 150 - -
Car10g00666 355 SMART serkin_6 71 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00666 Car11g00592 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g01287 Car-Chr5:11892559 Car10g00666 Car-Chr10:3423175 1.97E-159 dispersed
Car10g00666 Car-Chr10:3423175 Car12g01289 Car-Chr12:11950390 0 dispersed
Car10g00666 Car-Chr10:3423175 Car11g00592 Car-Chr11:3218237 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89143 PF00069 Pkinase 1.40E-71 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00666 K20603 - csv:101204545 686.797