Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00670 ATGCCCGGAAGGGAAAGTCCAAAGAGGACGATATTTGCTAGCAGTGGGTTTGGGCTATTACAAATGGTATCAGAGCCAGACACGAGGCGTTGTGCCAGCGAGGACGTTGGGCCCCCAAAGGGGAGTGGACCAGTTAACATCATTGTAGGTTCTCATGTCTGGATTGAAGATCCAAAACTAGCTTGGATTGACGGGGAAGTTTTTCGAATCAATGGCGAGGAAGTTCATGTCCGGGCTACCAATGGGAAAACAGTTGTTACGAATATATCGAAGATATACCCCAAGGATACCGAAGCACCTGCTGCAGGTGTAGATGACATGACGAAGCTGTCATACTTGCACGAACCGGGAGTTTTGAGCAACTTGGCGACCAGATATGAACTCAATGAAATCTATACATACACTGGAAATATACTTATTGCAATCAATCCATTCCAAAGATTACCCCATCTGTATGATATTCACATGATGGAACAATACAAAGGAGCTGGTTTCGGAGAACTAAGTCCTCATGTCTTTGCGGTTGCGGAAGTGGCATACAGGGCTATGATTAATGAAGGAAAAAGCAATTCAATCCTAGTCAGTGGAGAAAGTGGTGCTGGTAAGACCGAGACCACGAAGATGCTCATGCGGTATCTTGCGTACCTTGGAGGTCGATCTGGAGTGGAAGGGCGAACCGTTGAACAACAAGTCCTAGAATCCAATCCTGTTCTTGAAGCGTTCGGAAATGCGAAAACCGTTAGGAACAATAACTCAAGTCGCTTTGGTAAATTTGTTGAGATTCAATTTGATAAGAGCGGGAGAATCTCTGGCGCAGCTGTCCGAACTTATTTGCTTGAAAGGTCTCGAGTATGTCAGATCTCGGATCCTGAACGAAACTATCATTGCTTTTACCTTCTCTGTGCAGCTCCTCTTGAGGAACGAGCGAAGTATAAATTAGAAAACCCGAAATCGTTCCACTACTTAAATCAATCTAGCTGCTTTGAATTGGATGGCGTGAACGATGCGCATGAGTATCTTGCAACCAGAAGGGCTATGGATGTAGTTGGAATCAGTGAGGAGGAGCAGGACGCGATTTTTAGGGTCGTGGCTGCAATTTTGCATCTCGGAAATATTGAATTCTCAAAGGGAGAGGAGATTGATTCTTCAGTCATTAAGGATGAAAAATCAAGATTTCATCTTAATACGACTGCCGAACTGCTTAAGTGTGATGCAAAGAGTTTGGAAGTTGCACTGATTCAACGTGTTATGGTAACGCCAGAAGAAGTTATAACTCGAACGCTTGATCCTGTGGCTGCTTTGGGTAGTAGGGATGCCTTGGCTAAAACGATTTATTCACGACTCTTTGACTGGCTCGTGGAGAAGATTAACAATTCGATTGGGCAAGACCCGAACTCTAAATCATTGATCGGAGTTCTGGATATATATGGATTCGAGAGTTTTAAATTCAACAGTTTTGAACAGTTCTGCATCAATTTCACAAATGAAAAACTTCAGCAACATTTTAATCAGCATGTTTTCAAAATGGAGCAGGAGGAATATACCAAAGAGCAAATCAATTGGAGTTATATCGAGTTTGTTGATAACCAGGACGTCTTGGATCTGATCGAAAAGAAACCGGGGGGAATTATCGCACTTCTGGACGAGGCCTGCATGTTTCCTAAATCTACACACGAAACGTTCGCTCAAAAGTTATACCAAACGTTCAAAAACAACAAGCGCTTCATCAAGCCGAAGCTATCTCGTACGAGTTTTACAATATCTCATTATGCGGGCGAGGTGACTTATTTGGCAGATCTATTCTTGGACAAAAACAAAGACTACGTGGTAGCCGAACATCAGGCGCTATTGACATCCTCGAAATGCTCCTTTGCAAGAGCTTTATTTCCTCCTCAACCCGAGGAAACATCAAAATCCTCAAAATTTTCGTCCATTGGTTCGCGTTTTAAATTACAACTTCAATCATTAATGGAGACATTAAATTCGACCGAACCTCACTACATCAGATGTGTAAAGCCAAATAATGCGCTCAAGCCTGCTATTTTCGAGAATTCGAATGTTATCCAACAATTACGTTGTGGTGGTGTTCTTGAAGCGATTAGGATCAGCTGTGCTGGATATCCTACCAGAAGAACGTTTTACGAGTTCCTCCTACGTTTCGGGGTTCTTGCACCAGAAGTTTTGGACTATGATGACAAGGTAGCATGCCAGATGATCCTGGATAAAATGGGTTTGAAAGGTTATCAGATTGGTAAGACAAAAATCTTCCTGAGGGCTGGCCAGATGGCTTCTCTGGATGCAAAGAGAACAGAGGTGCTTAGCAATGCTGCCAGGACGATTCAAATGCAAATTAGAACGTTTATCGCACGCAAGGAGTTCGTTGCGTTACGTAAAGCTGCTATACAAGTGCAATCATTTACTCGAGGCGTATTGGCTCGAAATCTATTTGAACAGCTACAACGGGAAGCGGCAGCTTTAAAGATCCAGAAGTGTTTCAAGCGATATACTGCTCGAAAGTCATACTTAGATTTGCTTTCATCAGCAATCACATTGCAAACAGGGTTACGGGCAATGAAGGCTCGTAACGAATTCAGATTTAGAAGGCGTACTAAGGCAGCAATTATCGTTCAGGCACGTTTGCGTTGTCACATGGCGTATTCTTACTATACGAGACTCCAAAAGGCTGCATTAACCACACAGTGTAGTTGGAGGCAACGAGTCGCCCGAAAGGAGCTAAGAAAACTGAAAATGGCTGCAAAGGAAACCGGTGCACTCAAAGAAGCAAAAGACAAATTAGAAAAACGTGTCGAAGAACTTACATGGCGCTTACAACTCGAGAAGCGGATGAGGACTGATCTGGAAGAGGAGAAAGCTCAAGAAATTGCTAAATTACAAGATGCTTTACACAATATGCAATTACAAGTTGAAGAAGCAAATGCTCGAGTTATCGAAGAACGAGAGGCGATTCAGAAAGCTATTGAAGAAGCACCTCCAGTCATCAAGGAAACTCCCGTTTTCGTCGAGGATACCGAAAAAATCAATTCCTTAACGGCTGAGGTGGAGAGTTTGAAGGCTTCATTGCTGTCGGAGAAAACGACAGCTGAAGAAGCAAGAAAGGCTTGTACCGAAGCCGAAGCTAAAAGTATGGAGCTGACCAAAAGACTTCAAGATTCAGACAAGAAGGCGGATCAGCTTCAGGAGTCGGTGCAGCGGCTTGAAGAGAAGCTTTCAAATTTGGAATCAGAGAACCAGGTACTTCGTCAACAAGCCTTGACTATGTCGCCAACGGGAAAAGCTTTATCTGCAAGACCGAAGTCGATGATTATTCAGGACACCCGAGAGAACGGAAATATTTCGCACGGAGAGGTCAAAGTATCGTCGGATACAGCTCTTGTATTATCGAATCTACGCGAGCCTGAATCGGAAGAAAAACCACAGAAATCGCTTAATGAAAAGCAGCAGGAGAACCAGGACCTTCTAGTAAAGTGCATATCAAAAGACTTGGGCTTTTCTGGAGGCAAACCAGTAGCTGCTTGTGTCATATACAAATGTCTTCTTCACTGGAGGTCATTCGAAGTCGAACGAACGAGCATATTCGATCGACTCATTCAAACAATAGCTTCGTCGATAGAGGTCCAGGATAACAATGATGTATTAACTTATTGGTTATCTAATACATCCACATTATTGTTGCTCCTTCAACACACACTGAAAGCTAGTGGAGCTGCTAGCTTGACTCCTCAAAGGAGAAGAACCTCTACAGCTTCTCTTTTCGGAAGGATGTCTCAAGGATTAAGGGGATCTCCGCAAAGTGGTGGACTATCGTTTCTTAATGGTCGGGGGATAGGTCGAGTGGACGATTTTCGACAGGTTGAGGCGAAGTATCCAGCACTGTTGTTTAAGCAGCAGCTTACGGCGTTTTTGGAGAAAATATATGGAATGATAAGAGATAATATAAAGAAAGAGATCTCGCCTTTACTTGGATTATGTATTCAGGCTCCAAGGACATCAAGGGCAAGCTTAGTGAAAGGACGTTCCCAAGCTAATGCTATGGCTCAACAAGCCTTAATTGCACACTGGCAAAGCATTGTGAAAAGTTTAAACAATTACTTGAAGATCATGAAAGCAAACTACGTACCTCCGTTCCTCGTCCGCAAAGTTTTCACTCAGATATTTGCGTTCATTAACGTTCAACTATTTAACAGCCTTCTTTTGCGGCGTGAGTGTTGTTCGTTCAGCAACGGAGAGTATGTGAAAGCTGGGTTGTCTGAATTAGAACAGTGGTGCTCGGAAGCAACCGAGGAATATGCTGGGTCTGCCTGGGATGAACTGAAGCATATTAGGCAGGCTGTTGGATTCCTTGTTATTCATCAAAAACCCAAAAAGACATTGAATGAGATAACAAAAGATCTCTGTCCTGTGCTTAGCATACAACAGTTATATAGGATTAGTACAATGTACTGGGATGACAAATATGGCACGCATAGTGTATCTTCGGAAGTTATTTTGAGTATGCGAATTTTGATGACTGAAAACTCCAACAATGCTATTAGCTCATTCCTGTTAGATGATGATTCTAGTATCCCATTTTCTGTGGATGATATTTCCAAATCAATGAACCAAGTAGATGTAACAGACATTGATCCTCCACCGCTGATACGAGAAAACTCCGGGTTCGGGTTTTTGCTTCAACGCGCAGAGTGA 4704 43.05 MPGRESPKRTIFASSGFGLLQMVSEPDTRRCASEDVGPPKGSGPVNIIVGSHVWIEDPKLAWIDGEVFRINGEEVHVRATNGKTVVTNISKIYPKDTEAPAAGVDDMTKLSYLHEPGVLSNLATRYELNEIYTYTGNILIAINPFQRLPHLYDIHMMEQYKGAGFGELSPHVFAVAEVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAVRTYLLERSRVCQISDPERNYHCFYLLCAAPLEERAKYKLENPKSFHYLNQSSCFELDGVNDAHEYLATRRAMDVVGISEEEQDAIFRVVAAILHLGNIEFSKGEEIDSSVIKDEKSRFHLNTTAELLKCDAKSLEVALIQRVMVTPEEVITRTLDPVAALGSRDALAKTIYSRLFDWLVEKINNSIGQDPNSKSLIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEQINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQALLTSSKCSFARALFPPQPEETSKSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNALKPAIFENSNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFLLRFGVLAPEVLDYDDKVACQMILDKMGLKGYQIGKTKIFLRAGQMASLDAKRTEVLSNAARTIQMQIRTFIARKEFVALRKAAIQVQSFTRGVLARNLFEQLQREAAALKIQKCFKRYTARKSYLDLLSSAITLQTGLRAMKARNEFRFRRRTKAAIIVQARLRCHMAYSYYTRLQKAALTTQCSWRQRVARKELRKLKMAAKETGALKEAKDKLEKRVEELTWRLQLEKRMRTDLEEEKAQEIAKLQDALHNMQLQVEEANARVIEEREAIQKAIEEAPPVIKETPVFVEDTEKINSLTAEVESLKASLLSEKTTAEEARKACTEAEAKSMELTKRLQDSDKKADQLQESVQRLEEKLSNLESENQVLRQQALTMSPTGKALSARPKSMIIQDTRENGNISHGEVKVSSDTALVLSNLREPESEEKPQKSLNEKQQENQDLLVKCISKDLGFSGGKPVAACVIYKCLLHWRSFEVERTSIFDRLIQTIASSIEVQDNNDVLTYWLSNTSTLLLLLQHTLKASGAASLTPQRRRTSTASLFGRMSQGLRGSPQSGGLSFLNGRGIGRVDDFRQVEAKYPALLFKQQLTAFLEKIYGMIRDNIKKEISPLLGLCIQAPRTSRASLVKGRSQANAMAQQALIAHWQSIVKSLNNYLKIMKANYVPPFLVRKVFTQIFAFINVQLFNSLLLRRECCSFSNGEYVKAGLSELEQWCSEATEEYAGSAWDELKHIRQAVGFLVIHQKPKKTLNEITKDLCPVLSIQQLYRISTMYWDDKYGTHSVSSEVILSMRILMTENSNNAISSFLLDDDSSIPFSVDDISKSMNQVDVTDIDPPPLIRENSGFGFLLQRAE 1567
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3442085 3454807 + Carg12975-RA Car10g00670 155572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00670 1567 Coils Coil 915 995 - -
Car10g00670 1567 ProSiteProfiles IQ motif profile. 821 850 IPR000048 GO:0005515
Car10g00670 1567 Pfam Myosin N-terminal SH3-like domain 49 90 IPR004009 GO:0003774|GO:0005524|GO:0016459
Car10g00670 1567 Pfam DIL domain 1387 1490 IPR002710 -
Car10g00670 1567 Pfam Myosin head (motor domain) 104 758 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car10g00670 1567 ProSiteProfiles IQ motif profile. 844 873 IPR000048 GO:0005515
Car10g00670 1567 ProSiteProfiles IQ motif profile. 892 921 IPR000048 GO:0005515
Car10g00670 1567 ProSiteProfiles Dilute domain profile. 1200 1511 IPR002710 -
Car10g00670 1567 ProSiteProfiles IQ motif profile. 773 802 IPR000048 GO:0005515
Car10g00670 1567 ProSiteProfiles IQ motif profile. 796 825 IPR000048 GO:0005515
Car10g00670 1567 ProSiteProfiles Myosin motor domain profile. 102 770 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car10g00670 1567 Coils Coil 1034 1089 - -
Car10g00670 1567 Pfam IQ calmodulin-binding motif 823 841 IPR000048 GO:0005515
Car10g00670 1567 Pfam IQ calmodulin-binding motif 846 865 IPR000048 GO:0005515
Car10g00670 1567 Pfam IQ calmodulin-binding motif 775 793 IPR000048 GO:0005515
Car10g00670 1567 Pfam IQ calmodulin-binding motif 797 816 IPR000048 GO:0005515
Car10g00670 1567 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 48 97 IPR004009 GO:0003774|GO:0005524|GO:0016459
Car10g00670 1567 ProSiteProfiles IQ motif profile. 869 898 IPR000048 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00670 Car11g00596 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g01149 Car-Chr5:10977233 Car10g00670 Car-Chr10:3442085 0 dispersed
Car08g00045 Car-Chr8:251442 Car10g00670 Car-Chr10:3442085 0 dispersed
Car08g00481 Car-Chr8:3048381 Car10g00670 Car-Chr10:3442085 0 dispersed
Car10g00670 Car-Chr10:3442085 Car17g01260 Car-Chr17:9556230 0 dispersed
Car12g01111 Car-Chr12:10826809 Car10g00670 Car-Chr10:3442085 0 dispersed
Car17g00866 Car-Chr17:7298666 Car10g00670 Car-Chr10:3442085 3.80E-07 dispersed
Car18g00742 Car-Chr18:8498004 Car10g00670 Car-Chr10:3442085 0 dispersed
Car05g00347 Car-Chr5:1988431 Car10g00670 Car-Chr10:3442085 0 transposed
Car10g00670 Car-Chr10:3442085 Car11g00596 Car-Chr11:3231929 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00670 K10357 - csv:101204300 2819.65