Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00681 ATGAGCGCTAGAAGTATGTTTCCCTTCACCTCAGCTCAGTGGCAGGAGCTTGAAAATCAAGCTCTCGTCTTCAAATACATGGTTTCTGGTGTTCCTATACCTCCTGATCTCCTTTTCAGTATTAAAAGAAGTACCTTGGAGTCTCCTTTCACTTCTAAGCTCTTCCCACACCATTCTCAACATGTTGGATGGAACTGTTTGCAGATGAGTTTGGGGAGGAAGATAGACCCAGAACCAGGGAGGTGCAGGAGAACTGATGGGAAAAAGTGGAGATGCTCAAAAGAGGCGTACCCAGATTCGAAATACTGTGAGAGGCACATGCATAGAGGCAAGAATCGTTCAAGAAAGCCTGTGGATGTTCTGAAAACAACAGCAACAAACGAGTTAAACCACCTCTCAAGTCAAGCATTTTCTTCCTTAAATAAGAACTCATCCTTACACTCCTATCGGCCCTTCCCCGCTCCTCAAATGTCTTCAAATCCTAATGGGAATGGCATATCAACCAAAGATACCAATACCCTCTTGCTTCTGGATCCTGGTTCTTACTCGGACAGAGGCCCAGATTACAGGTACACTTATGGGCTAAAAGAGGAAGTGGATGAGCATGTTTTCTTTTCGCAAGAACCATCTGAAGCTACTGCGAGAGCTGATTTCTCTGCTTCTTCCACCGTTGATTCTCTGCAATTGACACCACTAACGATGAGTTGTTCTTCTCTATACCCAAAACAAAACAACTTCTCCTCTTTGCAGAGTGGTCAATCATGTTATCAGCTTCATCAGAGCCTCACAGACCCTTTAAAGCAACAAAAGAGAGAGGAATCGCAGAAGAAAGTTCACCGATTCTTCGATGAATGGCCTCAAAAAGAAGGAGGATCATGGCTTGATTTTAACGATAAATCGTCAAATATTGGCTCAGTCTCCACCACTCGGCTCTCAATTTCCATTCCCACCGCTTCCAACGAACTCCCCATTTTCAGATCCAAAAACCCATAA 993 44.11 MSARSMFPFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKRSTLESPFTSKLFPHHSQHVGWNCLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDVLKTTATNELNHLSSQAFSSLNKNSSLHSYRPFPAPQMSSNPNGNGISTKDTNTLLLLDPGSYSDRGPDYRYTYGLKEEVDEHVFFSQEPSEATARADFSASSTVDSLQLTPLTMSCSSLYPKQNNFSSLQSGQSCYQLHQSLTDPLKQQKREESQKKVHRFFDEWPQKEGGSWLDFNDKSSNIGSVSTTRLSISIPTASNELPIFRSKNP 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3535618 3537000 - Carg12964-RA Car10g00681 155583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00681 330 MobiDBLite consensus disorder prediction 148 181 - -
Car10g00681 330 Pfam QLQ 8 41 IPR014978 GO:0005524|GO:0005634|GO:0006355
Car10g00681 330 Pfam WRC 77 118 IPR014977 -
Car10g00681 330 MobiDBLite consensus disorder prediction 148 178 - -
Car10g00681 330 ProSiteProfiles QLQ domain profile. 8 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
Car10g00681 330 ProSiteProfiles WRC domain profile. 76 120 IPR014977 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g01337 Car10g00681 CCT
Car05g01337 Car10g00681 ECH
Car10g00681 Car11g00602 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00327 Car-Chr2:2267665 Car10g00681 Car-Chr10:3535618 1.78E-66 dispersed
Car10g00681 Car-Chr10:3535618 Car14g01092 Car-Chr14:9566099 5.00E-70 dispersed
Car01g00027 Car-Chr1:139119 Car10g00681 Car-Chr10:3535618 8.93E-73 wgd
Car10g00681 Car-Chr10:3535618 Car11g00602 Car-Chr11:3289920 0 wgd
Car10g00681 Car-Chr10:3535618 Car05g01337 Car-Chr5:12104148 2.11E-113 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4193 PF08879 WRC 1.10E-20 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00681 - - cpep:111780092 659.062