Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00689 ATGAAGAAGAAGGTATCGTTGAGGTCGTTTCTGCTGCCGTTCTGCTGCGGCGGGTTGCCGGCGAAGGCGGGGAAGAGGGTGGCGGCGAAGCAGAGTTCTTTCACTAGGCTTTCTATGGTGGATTTGAGCAATCCAAATTCTGTTCTTTCGGAGGATCTGTCTGTATCTCTGGCTGGCTGCAATATTCACATGTTCACTTTGGGAGAGATTAAGGTTATGACTCAGAGCTTCTCGACCGGTAACTTCCTCGGAGAAGGTGGCTTCGGACCGGTCTATAAGGGGTTCATCGACGACAAGCTTCGGGTAGGCCTCAAGGCTCAGCCTGTTGCTGTTAAGCTCTTGGACTTGGATGGATCTCAAGGCCACCGCGAGTGGTTGACGGAGGTGATTTTCTTGGGACAATTGCGAGATCCACATCTAGTGAAATTGATTGGATATTGCTGCGAAGATGAACACAGGGTGTTGGTTTATGAGTACATGCCAAGGGGCAGCTTAGAGAACCAGCTCTTTAGAAGATTTTCAGTGTCACTGCCATGGTCAACTAGAATGAAAATAGCTTTAGGAGCTGCCAAGGGACTGGCCTTCCTTCATGGAGCAGCAAAACCAGTAATTTACAGAGATTTCAAAGCTTCCAACATCTTGTTGGATTCCGATTACAACGCAAAGCTTTCCGATTTCGGGCTCGCCAAAGATGGTCCCGATGGAGACGACACCCATGTCTCGACTCGAGTCATGGGCACTGAAGGCTATGCCGCTCCCGAGTACGTTATGACAGGTCATTTGACGGCTATGAGTGATGTATATAGTTTCGGTGTGGTTCTTTTGGAGTTGTTGACGGGACGACGGTCGTTAGAGAAGAATCGGCCACATCGGGAGCAGAATTTGGTTGAGTTTGCTAGATCAATGTTGAATGACCCTAGAAAGCTGGGTCGGATTATGGACACGAGACTAGAAGGACAGTACTCGGAGATTGGAGCAAGAAAGGCGGCGGCATTGGCATATCAATGTTTGAGCCAACGTCCGAAGCAACGGCCGACGATGAACGAAGTCGTGAAAATCTTGGAGCCATTAAAGGATTACCAAGACATGCCTATTGGAACCTTTGTTTTCGAGATGCCGGAGAAGACTCTGACATCGAAGGGAAGTGAAACTTTGAAAGAAGAGAGGAAGAAAGTGAACGACGGAGGGCTTCAGGAAAATGGTCATCATAGAGGACAAAATCATCATCTCCGACACCCCAAATCGCTGAATTCATTACCTGAAAATGGGGTGAGGAACGTCAACCGACGGGCGACGAGCTCAGTGTTGCACCCTAGAGGTGGCAACGGCGACCGAAGACCTTAG 1344 49.18 MKKKVSLRSFLLPFCCGGLPAKAGKRVAAKQSSFTRLSMVDLSNPNSVLSEDLSVSLAGCNIHMFTLGEIKVMTQSFSTGNFLGEGGFGPVYKGFIDDKLRVGLKAQPVAVKLLDLDGSQGHREWLTEVIFLGQLRDPHLVKLIGYCCEDEHRVLVYEYMPRGSLENQLFRRFSVSLPWSTRMKIALGAAKGLAFLHGAAKPVIYRDFKASNILLDSDYNAKLSDFGLAKDGPDGDDTHVSTRVMGTEGYAAPEYVMTGHLTAMSDVYSFGVVLLELLTGRRSLEKNRPHREQNLVEFARSMLNDPRKLGRIMDTRLEGQYSEIGARKAAALAYQCLSQRPKQRPTMNEVVKILEPLKDYQDMPIGTFVFEMPEKTLTSKGSETLKEERKKVNDGGLQENGHHRGQNHHLRHPKSLNSLPENGVRNVNRRATSSVLHPRGGNGDRRP 447
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 3575767 3578093 + Carg12956-RA Car10g00689 155591
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car10g00689 447 ProSiteProfiles Protein kinase domain profile. 77 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car10g00689 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Car10g00689 447 Pfam Protein tyrosine and serine/threonine kinase 79 354 IPR001245 GO:0004672|GO:0006468
Car10g00689 447 MobiDBLite consensus disorder prediction 379 447 - -
Car10g00689 447 MobiDBLite consensus disorder prediction 419 435 - -
Car10g00689 447 MobiDBLite consensus disorder prediction 380 404 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Car05g01342 Car10g00689 CCT
Car05g01342 Car10g00689 ECH
Car10g00689 Car11g00610 CST
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00689 Car-Chr10:3575767 Car16g00465 Car-Chr16:2949967 1.31E-145 dispersed
Car01g01311 Car-Chr1:11756567 Car10g00689 Car-Chr10:3575767 1.10E-155 wgd
Car10g00689 Car-Chr10:3575767 Car11g00610 Car-Chr11:3335484 0 wgd
Car10g00689 Car-Chr10:3575767 Car17g00646 Car-Chr17:6046593 5.61E-143 wgd
Car10g00689 Car-Chr10:3575767 Car05g01342 Car-Chr5:12122848 0 wgd
Car10g00689 Car-Chr10:3575767 Car08g00684 Car-Chr8:4382033 7.48E-153 wgd
Car10g00689 Car-Chr10:3575767 Car09g00319 Car-Chr9:1777465 1.38E-158 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89144 PF00069 Pkinase 1.80E-44 CL0016 Car PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00689 - - csv:101209291 710.679