Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car10g00689 | ATGAAGAAGAAGGTATCGTTGAGGTCGTTTCTGCTGCCGTTCTGCTGCGGCGGGTTGCCGGCGAAGGCGGGGAAGAGGGTGGCGGCGAAGCAGAGTTCTTTCACTAGGCTTTCTATGGTGGATTTGAGCAATCCAAATTCTGTTCTTTCGGAGGATCTGTCTGTATCTCTGGCTGGCTGCAATATTCACATGTTCACTTTGGGAGAGATTAAGGTTATGACTCAGAGCTTCTCGACCGGTAACTTCCTCGGAGAAGGTGGCTTCGGACCGGTCTATAAGGGGTTCATCGACGACAAGCTTCGGGTAGGCCTCAAGGCTCAGCCTGTTGCTGTTAAGCTCTTGGACTTGGATGGATCTCAAGGCCACCGCGAGTGGTTGACGGAGGTGATTTTCTTGGGACAATTGCGAGATCCACATCTAGTGAAATTGATTGGATATTGCTGCGAAGATGAACACAGGGTGTTGGTTTATGAGTACATGCCAAGGGGCAGCTTAGAGAACCAGCTCTTTAGAAGATTTTCAGTGTCACTGCCATGGTCAACTAGAATGAAAATAGCTTTAGGAGCTGCCAAGGGACTGGCCTTCCTTCATGGAGCAGCAAAACCAGTAATTTACAGAGATTTCAAAGCTTCCAACATCTTGTTGGATTCCGATTACAACGCAAAGCTTTCCGATTTCGGGCTCGCCAAAGATGGTCCCGATGGAGACGACACCCATGTCTCGACTCGAGTCATGGGCACTGAAGGCTATGCCGCTCCCGAGTACGTTATGACAGGTCATTTGACGGCTATGAGTGATGTATATAGTTTCGGTGTGGTTCTTTTGGAGTTGTTGACGGGACGACGGTCGTTAGAGAAGAATCGGCCACATCGGGAGCAGAATTTGGTTGAGTTTGCTAGATCAATGTTGAATGACCCTAGAAAGCTGGGTCGGATTATGGACACGAGACTAGAAGGACAGTACTCGGAGATTGGAGCAAGAAAGGCGGCGGCATTGGCATATCAATGTTTGAGCCAACGTCCGAAGCAACGGCCGACGATGAACGAAGTCGTGAAAATCTTGGAGCCATTAAAGGATTACCAAGACATGCCTATTGGAACCTTTGTTTTCGAGATGCCGGAGAAGACTCTGACATCGAAGGGAAGTGAAACTTTGAAAGAAGAGAGGAAGAAAGTGAACGACGGAGGGCTTCAGGAAAATGGTCATCATAGAGGACAAAATCATCATCTCCGACACCCCAAATCGCTGAATTCATTACCTGAAAATGGGGTGAGGAACGTCAACCGACGGGCGACGAGCTCAGTGTTGCACCCTAGAGGTGGCAACGGCGACCGAAGACCTTAG | 1344 | 49.18 | MKKKVSLRSFLLPFCCGGLPAKAGKRVAAKQSSFTRLSMVDLSNPNSVLSEDLSVSLAGCNIHMFTLGEIKVMTQSFSTGNFLGEGGFGPVYKGFIDDKLRVGLKAQPVAVKLLDLDGSQGHREWLTEVIFLGQLRDPHLVKLIGYCCEDEHRVLVYEYMPRGSLENQLFRRFSVSLPWSTRMKIALGAAKGLAFLHGAAKPVIYRDFKASNILLDSDYNAKLSDFGLAKDGPDGDDTHVSTRVMGTEGYAAPEYVMTGHLTAMSDVYSFGVVLLELLTGRRSLEKNRPHREQNLVEFARSMLNDPRKLGRIMDTRLEGQYSEIGARKAAALAYQCLSQRPKQRPTMNEVVKILEPLKDYQDMPIGTFVFEMPEKTLTSKGSETLKEERKKVNDGGLQENGHHRGQNHHLRHPKSLNSLPENGVRNVNRRATSSVLHPRGGNGDRRP | 447 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 3575767 | 3578093 | + | Carg12956-RA | Car10g00689 | 155591 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car10g00689 | 447 | ProSiteProfiles | Protein kinase domain profile. | 77 | 358 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car10g00689 | 447 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 203 | 215 | IPR008271 | GO:0004672|GO:0006468 | |
Car10g00689 | 447 | Pfam | Protein tyrosine and serine/threonine kinase | 79 | 354 | IPR001245 | GO:0004672|GO:0006468 | |
Car10g00689 | 447 | MobiDBLite | consensus disorder prediction | 379 | 447 | - | - | |
Car10g00689 | 447 | MobiDBLite | consensus disorder prediction | 419 | 435 | - | - | |
Car10g00689 | 447 | MobiDBLite | consensus disorder prediction | 380 | 404 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car05g01342 | Car10g00689 | CCT | |
Car05g01342 | Car10g00689 | ECH | |
Car10g00689 | Car11g00610 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car10g00689 | Car-Chr10:3575767 | Car16g00465 | Car-Chr16:2949967 | 1.31E-145 | dispersed | |
Car01g01311 | Car-Chr1:11756567 | Car10g00689 | Car-Chr10:3575767 | 1.10E-155 | wgd | |
Car10g00689 | Car-Chr10:3575767 | Car11g00610 | Car-Chr11:3335484 | 0 | wgd | |
Car10g00689 | Car-Chr10:3575767 | Car17g00646 | Car-Chr17:6046593 | 5.61E-143 | wgd | |
Car10g00689 | Car-Chr10:3575767 | Car05g01342 | Car-Chr5:12122848 | 0 | wgd | |
Car10g00689 | Car-Chr10:3575767 | Car08g00684 | Car-Chr8:4382033 | 7.48E-153 | wgd | |
Car10g00689 | Car-Chr10:3575767 | Car09g00319 | Car-Chr9:1777465 | 1.38E-158 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
89144 | PF00069 | Pkinase | 1.80E-44 | CL0016 | Car | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car10g00689 | - | - | csv:101209291 | 710.679 |