Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00692 ATGGGGTCCATGGCTAGATTACTCGTTGCTTCCTTTCTTCTTCTTCTTCTTCTTCTTCCTTGTGTCTTTGTCAATGCCAAGAGAACCTACATTGTTCGCATGAAACATCATGCTCTGCCATCTGATTATCTCACCCACCATGACTGGTACTCTGCCCATCTCCAATCTCTGTCCTCCTCTGCTACCTCCGATTCCCTTCTCTACACCTACACCTCCGCCTACCATGGCTTCGCTGCTTCTCTTGACCCAGATGAAGCCGAATTGCTCCGCCAATCCGATTCAGTTCTGGGTGTCTATGAAGACACTGTTTACAATCTTCACACAACTCGCACTCCGGGTTTCCTCGGCCTCGACTCCGATTTCGGCTTGTGGGAAGGTCACAACACTCAGGATCTCGACCAGGCTTCTCATGATGTCATCATTGGGGTTCTCGATACTGGGATTTGGCCGGAGTCGAAGAGCTTTGATGACACCGGGATGCCGGAGATCCCATCACGGTGGCGTGGAGAATGTGAATCGGGACCCGATTTCAGCCCTTCTCTCTGTAACAAGAAACTAATCGGAGCTCGCAGCTTCTCGAAGGGTTATCAAATGGCTTCCGGTGGTGGATACTTTAGAAAATCCAGAGAGAACGAGTCGCCTCGTGACCAGGATGGGCACGGCACGCACACTGCGAGCACAGCTGCTGGGTCACATGTGGCTAACGCGAGCCTACTTGGGTATGCTAGAGGTATAGCTAGGGGAATGGCTCCTCAAGCAAGAGTTGCCGCTTACAAGACCTGTTGGCCCACTGGTTGCTTTGGATCTGACATTCTTGCCGGTATGGATCGGGCAATATCTGACGGCGTCGATGTGCTATCACTCTCTTTGGGCGGTGGCTCTGCACCGTATTACAGGGATACAATAGCAATCGGAGCATTTGCGGCCATGGAGAAGGGGGTTTTCGTTTCGTGCTCAGCTGGAAACAGTGGGCCAAACAAGGCGTCTCTGGCTAATGTGGCCCCGTGGATCATGACAGTCGGAGCCGGAACTCTGGACCGAGACTTCCCAGCTTATGTCCAACTCGGAAATGGCAAGCGGTTCACTGGAGTGTCACTCTACAGTGGCCAAGGAATGGGAAATAAACCGGTGGCTTTGGTGTACAACAAAGGAAGCAACAGCTCCAGCAACATGTGCTTACCCGGATCTCTTGAGCCGGCGTTTGTTCGGGGGAAAGTGGTAATCTGCGACAGGGGAATCAACGCCAGAGTAGAGAAGGGAGGGGTGGTGAGAGATGCAGGTGGCATTGGGATGATTCTGGCAAACACGGCAGCCAGTGGGGAAGAACTGGTGGCTGACAGTCACTTACTGCCGGCCGTGGCGGTTGGGGCGAAAACCGGCGACTTGATCCGGCAGTATGTACGGTCAGTAGCGAAGCCGACGGCCGTGCTGAGCTTTGGTGGGACAGTTCTGAACGTGCGCCCATCTCCAGTGGTGGCGGCCTTCAGTTCCAGAGGACCCAACTTGGTAACGCCCCAAATCCTTAAGCCGGACGTTATAGGGCCTGGCGTTAACATCCTGGCCGCCTGGTCTGAGTCCATCGGGCCTACTGGATTGGACAACGATAAGAGGAAAACTCAGTTCAATATCATGTCAGGAACATCCATGTCTTGCCCGCACATAAGTGGGCTGGCGGCGTTGCTGAAGGCAGCTCATCCATCATGGAGTCCAAGCGCAATCAAGTCTGCATTAATGACCACTGCCTACACGCAGGACAACACCAACTCATCTCTCCGGGATGCTGCCGGAGGGGCGTTTTCCAATCCATGGGCTCATGGAGCTGGCCATGTTGATCCTCACAAAGCCCTCTCCCCCGGTCTTGTATACGACATCTCGACCAATGATTATATTACCTTTTTGTGCTCCTTGGACTACGGGATCGATCATGTTCAGGCAATCGCGAAGCGATCGAACATAACCTGCTTGAAAAAGTTTGCTGACCCAGGGCAACTAAACTACCCTTCATTTTCAGTTGTGTTTGGGAGCAAGAGGGTTGTCCGGTACACTCGTATAGTTACCAATGTTGGGGCTGCAGGGTCAGTTTATGAAGTGGCTACTACTGCACCGTCGGTTGTGAAGGTGACGGTGAAACCTTCAAAGCTTGTGTTCTCTAAAGTTGGGGAGAGAAAGAGGTACACTGTTACATTCGTGGCGAGCAGGGACGCTGCTCGAACCACGAGATATGGGTTTGGATCGATTGCTTGGAGCAATGACCAACACCAAGTTAGAAGCCCGGTGGCATTCGCCTGGACCAAGTTGTGA 2301 52.85 MGSMARLLVASFLLLLLLLPCVFVNAKRTYIVRMKHHALPSDYLTHHDWYSAHLQSLSSSATSDSLLYTYTSAYHGFAASLDPDEAELLRQSDSVLGVYEDTVYNLHTTRTPGFLGLDSDFGLWEGHNTQDLDQASHDVIIGVLDTGIWPESKSFDDTGMPEIPSRWRGECESGPDFSPSLCNKKLIGARSFSKGYQMASGGGYFRKSRENESPRDQDGHGTHTASTAAGSHVANASLLGYARGIARGMAPQARVAAYKTCWPTGCFGSDILAGMDRAISDGVDVLSLSLGGGSAPYYRDTIAIGAFAAMEKGVFVSCSAGNSGPNKASLANVAPWIMTVGAGTLDRDFPAYVQLGNGKRFTGVSLYSGQGMGNKPVALVYNKGSNSSSNMCLPGSLEPAFVRGKVVICDRGINARVEKGGVVRDAGGIGMILANTAASGEELVADSHLLPAVAVGAKTGDLIRQYVRSVAKPTAVLSFGGTVLNVRPSPVVAAFSSRGPNLVTPQILKPDVIGPGVNILAAWSESIGPTGLDNDKRKTQFNIMSGTSMSCPHISGLAALLKAAHPSWSPSAIKSALMTTAYTQDNTNSSLRDAAGGAFSNPWAHGAGHVDPHKALSPGLVYDISTNDYITFLCSLDYGIDHVQAIAKRSNITCLKKFADPGQLNYPSFSVVFGSKRVVRYTRIVTNVGAAGSVYEVATTAPSVVKVTVKPSKLVFSKVGERKRYTVTFVASRDAARTTRYGFGSIAWSNDQHQVRSPVAFAWTKL 766
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3589429 3592192 + Carg12953-RA Car10g00692 155594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00692 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 546 556 IPR023828 -
Car10g00692 766 ProSiteProfiles Serine proteases, subtilase domain profile. 120 616 - -
Car10g00692 766 Gene3D - 346 484 - -
Car10g00692 766 Pfam Peptidase inhibitor I9 29 107 IPR010259 -
Car10g00692 766 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
Car10g00692 766 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Car10g00692 766 PRINTS Subtilisin serine protease family (S8) signature 545 561 IPR015500 -
Car10g00692 766 Pfam PA domain 379 462 IPR003137 -
Car10g00692 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 763 IPR045051 -
Car10g00692 766 Gene3D - 633 763 - -
Car10g00692 766 MobiDBLite consensus disorder prediction 203 227 - -
Car10g00692 766 CDD PA_subtilisin_like 352 475 - -
Car10g00692 766 Pfam Subtilase family 137 587 IPR000209 GO:0006508|GO:0008236
Car10g00692 766 Pfam Fibronectin type-III domain 663 760 IPR041469 -
Car10g00692 766 SUPERFAMILY Subtilisin-like 106 620 IPR036852 GO:0004252|GO:0006508
Car10g00692 766 SUPERFAMILY Protease propeptides/inhibitors 29 105 - -
Car10g00692 766 Gene3D Peptidase S8/S53 domain 138 629 IPR036852 GO:0004252|GO:0006508
Car10g00692 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 107 IPR037045 -
Car10g00692 766 PANTHER CUCUMISIN-RELATED 19 763 - -
Car10g00692 766 CDD Peptidases_S8_3 104 582 IPR034197 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01468 Car-Chr2:9579646 Car10g00692 Car-Chr10:3589429 0 dispersed
Car03g00848 Car-Chr3:6850719 Car10g00692 Car-Chr10:3589429 0 dispersed
Car04g00050 Car-Chr4:266774 Car10g00692 Car-Chr10:3589429 4.28E-06 dispersed
Car05g00130 Car-Chr5:659431 Car10g00692 Car-Chr10:3589429 0 dispersed
Car10g00692 Car-Chr10:3589429 Car16g00144 Car-Chr16:827976 0 dispersed
Car12g00864 Car-Chr12:8417233 Car10g00692 Car-Chr10:3589429 2.93E-59 dispersed
Car19g00095 Car-Chr19:776790 Car10g00692 Car-Chr10:3589429 0 dispersed
Car02g01261 Car-Chr2:8478096 Car10g00692 Car-Chr10:3589429 0 transposed
Car10g00692 Car-Chr10:3589429 Car11g00612 Car-Chr11:3344758 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00692 - - csv:101209781 1390.56