Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00750 CATCTTTCTCTCTTAAAAACCGCTATCGCCTCCGTTTTCCGTTCCATTCAACCTGCGCTCGTCTCGAATGCCAGAGATTTTCCTTTATATGCATTAGATTTTCGATTCCTACTGATCGCCAAGTTTTCGCAGGTTTCATTAGATTTTCGATTCTCTGCAATTTTTTCTGTTCTTCAATCCATAATTCATCGCAAAATGAGGCTCCAAGTGAACGACGGCGATGTCGACGACGATCTTGTTCCTCCCCCCAACTTCTCCAGTGTTGAGGATGGCATTTTCCGATCCGGCTTCCCTCAGTCTTCCAATTTTCCATTCCTCAAGAATCTAAATCTCCGCTCCATCATATATTTGTGTCCTGAACCCTACCCAGAGGAGAATTTGGAGTTTCTTAGAGCTAATAACATCAAGCTTTTTCAATTCAAAATTGAAGGGACAAAGGAGCCTTTCGTTTCGATTCCGAAGGATGCTATTCTGGACGCCCTAAAAATCCTAATTGATGTTAGGAATCACCCCATTTTGATCCACTGCAAGCGTGGAAAGCATCGAACAGGCTCGCTCGTGGGTTGCCTGAGGAAGTTCCAGAACTGGTGCTTGACATCAGTGTTCGAGGAGTACCAGCGATATGCAGGCGTGAAATCAAGGGCAACGGATCTACAATTCATCGAGGCATTCGACATAGAGCCTCTGAGGCAATGTGTTTACAGCATCATATACCAGTACCAAGGGTATAGCTCAAACAAGAGAAGACTATTGTACAGAGAAGAGAAGTTGCAGAAGCCCCAAACAACACCAGTTTAG 798 44.49 HLSLLKTAIASVFRSIQPALVSNARDFPLYALDFRFLLIAKFSQVSLDFRFSAIFSVLQSIIHRKMRLQVNDGDVDDDLVPPPNFSSVEDGIFRSGFPQSSNFPFLKNLNLRSIIYLCPEPYPEENLEFLRANNIKLFQFKIEGTKEPFVSIPKDAILDALKILIDVRNHPILIHCKRGKHRTGSLVGCLRKFQNWCLTSVFEEYQRYAGVKSRATDLQFIEAFDIEPLRQCVYSIIYQYQGYSSNKRRLLYREEKLQKPQTTPV 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3963276 3965603 + Carg17793-RA Car10g00750 155652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00750 265 Pfam Tyrosine phosphatase family 79 229 IPR004861 -
Car10g00750 265 ProSiteProfiles Dual specificity protein phosphatase domain profile. 84 235 IPR020422 GO:0006470|GO:0008138
Car10g00750 265 ProSitePatterns Tyrosine specific protein phosphatases active site. 174 184 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00750 Car-Chr10:3963276 Car11g01620 Car-Chr11:12839350 7.96E-75 dispersed
Car10g00750 Car-Chr10:3963276 Car11g00841 Car-Chr11:5046967 6.57E-129 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00750 K18045 - csv:101211082 345.51