Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00782 ATGGATCAGACGGCTCCTAAGGTTCTAGCTGTTGGTTTGTTCTTGTTCAACGCTGTTGAATGCACCATGGGAGTTTCAGGAAAATGGTTCAAAGCGTTAGTTGGTTCAAAGAAGTCAGAAAAATCTCAGTCATCAGAACACGATGAAAACGCGAGGACAGCCACCAACAAGTTTTGGCATCGGAGAAAGCATTCTGTTGATATCGATGCAGATAAACTTCAGCACGAGTTCAACTCGAATTTTACACCATTTGTTGAAGAGTCCAATGCTCTTTCAGATCCAGGAACAGCTTCTATTCCTTCTGATTCACTTCAAACATATGATGCATTGCATAATCAACACAACGATATAGAAGAACAGGCCGCGATATGCATCCAAACCATGTTTCGAGGATTTCTGGCTAGAAGAGCTCTTCGAGCTCTCAAGGGATTGGTTAGACTTCAAGCTCTTGTCAGGGGACATGCTGTCAGAAAACAAGCTGCAATAACTCTACGCTGTATGCAAGCTTTAGTGAGAGTTCAGGCTCGTGTTCGAGCAAGGCACGTACGTATTGCATTGGAAAGTGAAACTGCACAACAAAAACTTCAACAACAAATTGAAAACCAAGCTCGAGTTCGAGAAATTGAATGGCAAGCAGGAACAAGACAACAGGCTGCCCTGTTCCAGTTTGAACCAGATAAAAACAGCTGGGGTTGGAACTGGTTGGAAAGATGGATGGCTGTTCGTCCGTGGGAAAACCGCTTTCTCGACATCAATCTCAAAGACGGAGTGATGATTCGTGAGAACGGATCAGCTGAGGGCAAAAGTAACACTAAATCTCATATACAAACTACTGGCAAGAAAACAAACTTAGTGACTGATCAACCAAACCTCTCGAGCCAAAGAACCGCTGTCTCGCATTCTGATGGATGTGGTTCGTCGTCCCCGACTAAGTCAGCTGGCATTGTAGAGGTATCCAGTGCACAGGTTCAAAAGCTCAAGCATAAACTTGCACCTGAGAGGCCACTTGAACAAGTCAAACCTAAAGTAGATACCGATCCTGGTAGTCAAAACCGAACGGTGAGAAACTCGACTGGCAAAGCGACCGTTGAACCGAAGCCGATATCAAGAGGTGACTCAAAAGCTGCAAAACCCAGATCACAAAACTGA 1149 44.65 MDQTAPKVLAVGLFLFNAVECTMGVSGKWFKALVGSKKSEKSQSSEHDENARTATNKFWHRRKHSVDIDADKLQHEFNSNFTPFVEESNALSDPGTASIPSDSLQTYDALHNQHNDIEEQAAICIQTMFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARHVRIALESETAQQKLQQQIENQARVREIEWQAGTRQQAALFQFEPDKNSWGWNWLERWMAVRPWENRFLDINLKDGVMIRENGSAEGKSNTKSHIQTTGKKTNLVTDQPNLSSQRTAVSHSDGCGSSSPTKSAGIVEVSSAQVQKLKHKLAPERPLEQVKPKVDTDPGSQNRTVRNSTGKATVEPKPISRGDSKAAKPRSQN 382
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4247644 4256065 + Carg17825-RA Car10g00782 155684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00782 382 MobiDBLite consensus disorder prediction 344 363 - -
Car10g00782 382 MobiDBLite consensus disorder prediction 326 382 - -
Car10g00782 382 ProSiteProfiles IQ motif profile. 142 169 IPR000048 GO:0005515
Car10g00782 382 MobiDBLite consensus disorder prediction 263 313 - -
Car10g00782 382 ProSiteProfiles IQ motif profile. 118 146 IPR000048 GO:0005515
Car10g00782 382 MobiDBLite consensus disorder prediction 327 341 - -
Car10g00782 382 MobiDBLite consensus disorder prediction 264 313 - -
Car10g00782 382 Pfam IQ calmodulin-binding motif 120 139 IPR000048 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00782 Car-Chr10:4247644 Car15g00406 Car-Chr15:2112389 3.92E-35 dispersed
Car16g01191 Car-Chr16:10070884 Car10g00782 Car-Chr10:4247644 5.95E-19 dispersed
Car10g00782 Car-Chr10:4247644 Car11g00811 Car-Chr11:4806138 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00782 - - csv:101204117 562.762