Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00793 ATGGCCACTCAGGCACTTGTTTCATCTTCCTTAACCTCCACGGTGGGCGCCGCCAGACAAAGATTTGGTCCCAAACCCTGTCTTGGATCCTCCACAAAACAAGCTTCTTTTGTTGTTAGAGCTGAAGCCACTCCTCCCGTTAAGCAAACCGAGCATTATGGTTTGCTTCAAAACAAAGCCTTTCTTACTTGGATGGAAGGGCTATCGGACCCTGAAGGCACGGGAGGGTTCATCGAGCCGAGATGGTTGGCATACGGGGAGGTAATCAACGGGCGGTTCGCAATGTTGGGAGTAATAGGAGCCATAGCCCCAGAGATATTAGGGTCACTAGGGCTAATCCCACCAGAAACAGCCCTCCCATGGTTCAAAACTGGGGTGATCCCACCAGCAGGGACCTACAACTATTGGGCAGACCCCTACACACTATTTGTACTTGAAATGGCTCTAATGGGGTTCGCTGAACATAGAAGATTTCAAGATTGGGCTAAGCCAGGGTCCATGGGGAAGCAGTACTTCTTGGGTCTAGAGAGGTTCTTGGGTGGGTCAGGGGACCCAGCTTACCCAGGTGGGCCCTTGTTCAACCCTCTAGGGTTTGGTAAAGATGAGAAGTCAATGAAGGATTTGAAGCTAAAAGAAGTGAAGAATGGAAGGCTTGCAATGTTGGCCATATTGGGTTTGTTTATACAAGGACTTGTCACTGGCGTTGGCCCTTACCAAAACCTTTTGAACCATTTGTCTGACCCTATTAACAATAACCTCTTGACAAGCCTTAAATTTCACTAG 783 48.66 MATQALVSSSLTSTVGAARQRFGPKPCLGSSTKQASFVVRAEATPPVKQTEHYGLLQNKAFLTWMEGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGVIGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLERFLGGSGDPAYPGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGLFIQGLVTGVGPYQNLLNHLSDPINNNLLTSLKFH 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4359492 4360622 + Carg17836-RA Car10g00793 155695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00793 260 Pfam Chlorophyll A-B binding protein 72 229 IPR022796 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00793 Car-Chr10:4359492 Car12g00507 Car-Chr12:3351210 6.39E-44 dispersed
Car10g00793 Car-Chr10:4359492 Car11g00797 Car-Chr11:4703072 4.57E-154 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00793 K08909 - csv:101202993 445.662