Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00876 ATGTTCGGGATGACAGCGGAGGCGACGACCGTGACAACAGTGGCGGTGATAGTCACGATGGCGGGGTGGTTGCTCGGTGGAGTTGAGGGTAGAGAACCAGTGTTGCATAGAGTTGGAGGAGGAAAATACACTTGGACAACTAATGTTAACTTCACTGATTGGTCAATTCACGAGCACTTTTACGTTGGTGATTGGCTCTATTTCGGGTTCGATAAACGTATCTACAACGTGCTACAAGTGAACAAAACGAGCTACGACAGTTGCAACGAGAATGATTTCGTTTTCAACGTTACGAGAGGGGGACGAGACGTGTTCAATCTAACACAAGCAAAGCCATACTACTTTCTAAGTGGAAGAGGGTTTTGTTTTCAAGGAATGAAGGTTGCTATCTTTGTTGAAGACTCGCCTCCCATTTCATCACCCAAAGTTTCAAACCATTCTTCATCTATTCAACCATTAAAGCCTCTCTCATCCCTCTCGGTATTGATCACGCTTGCCTTCGCTAAAATCGTTCTTCTAAATTAG 525 44.76 MFGMTAEATTVTTVAVIVTMAGWLLGGVEGREPVLHRVGGGKYTWTTNVNFTDWSIHEHFYVGDWLYFGFDKRIYNVLQVNKTSYDSCNENDFVFNVTRGGRDVFNLTQAKPYYFLSGRGFCFQGMKVAIFVEDSPPISSPKVSNHSSSIQPLKPLSSLSVLITLAFAKIVLLN 174
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5243593 5244229 - Carg16974-RA Car10g00876 155778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00876 174 ProSiteProfiles Phytocyanin domain profile. 34 134 IPR003245 GO:0009055
Car10g00876 174 Pfam Plastocyanin-like domain 45 126 IPR003245 GO:0009055
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00876 Car-Chr10:5243593 Car11g00977 Car-Chr11:6521317 6.49E-46 dispersed
Car10g00876 Car-Chr10:5243593 Car19g00030 Car-Chr19:214048 1.55E-12 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00876 - - cmos:111461613 346.665