Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00915 ATGACTGTTGATCATGCATTAGAAGAGCTAGTGCAAATTGCTCAATGTATTGCAGATTGCCCTGGTACTGAGGTGAGGGTTTTGGTTCAAAGGCTTGCTGAGCTTGTTATGGGACATATGGGCGGACCTGTAAAGGACGCCCATTTTATGCTAGCAAGGTGGATGGAAAGAAGCACAGAGTTAAGGACTTCTCTTCACACCAGTGTATTGCCTATTGGTTCCATCAATATTGGCCTCTCAAGACATCGTGCATTGCTTTTCAAGGTGTTAGCTGACAGTATCAAGATGCCTTGTAGGCTTGTTAAAGGTAGTCACTATACAGGTGTCGAAGAAGATGCTGTGAACATTATAAAGTTGGAGGATGAAAGGGAGTTTTTGGTTGATCTAATGGCAGCTCCTGGAACACTTATACCAGCAGACATATTAAGTGCAAAGGATACTACTTCCATTAAGCCTTACAACCCTAAAGTAAGCAAAATTCCTTCTCTTCACCACTATAATGATGCTGGAATTTCTTCTACGAAGCCAACATCATTACTTGAGGAAGGCAGCAGTCAAAACTTTGAAGCAGAGGCCAGCTCACTGGTGGATGAGAAACTGAGCTATGGAAGGACAGAGTCTGTGCCGTCAAGCTCAGGTACTGAGGCTTCTCGATACAAAGGGGCCCATTTTGGTGATAGTAATGTTAGACTGAATGTCAATGTAGTTTCACTTGGTCAAAGCTCCGAGGATTCCAAAAATCTTTTTGAAGATCTTAATCCTTTCCAAATAAAAGGAACTGGAAAAAGTTTCATTCTTAACAAATCCTCTGACAATAAAATTGAGGAGCTTCGGAAAACTGCTATTGGGCATGCTCCTGTGCCGTTATGGAAAAACCGGGTTGTTTTCAATGCAGTTCCCAAGAATAAAGAGTATGATTATATGGAGGGCCGTTTTCCAAGAACTAATTGTAGACCTAATGATCATAATATAGCATCGTCTTTTTCTGCAAGCTCTTCTGTCTCTGAAAATGTTAATCCTAGTGGTTCGGGAATATCCATTGACTCGAGGGTATCGAATAGAAGTGCTGAAGTTGGAAGTTCTTCATCTAATATGAACTCACGGTCGACATCCACAATGATAGAGCCTAATATTTTGCCTTTGATTGACGAGCAGAACAGAAAGCTCAATGGAGAATATTCTGGAAATATAGACATGCAGGACGAAAAGGTAGATGCTGTTGTTGGACGTGATAATTTAAGCAGATTTGATAACCGTAGAAAGTTCACATATGATAGATCTGTTGGGACCAATTTGATATTGAAGGATCCCGGAAGTCCCAGCACATTGATTGATCCAAGTTCGAGGAGTAGGTTTGAGCAAGTTTATGATGACGTGGATGTAGGCCAATGTGAAATCCAATGGGAGGACCTCGTTATTGGGGAAAGGATTGGACTAGGTTCATATGGAGAAGTCTACCATGCTGATTGGAATGGCACAGAGGTTGCTGTGAAGAAATTCTTAGACCAGGATTTTTCTGGCGCTGCTTTAGCTGAGTTCAAAAGAGAAGTATTGATAATGCGGCAGCTACGTCATCCAAATATTGTTCTTTTTATGGGTGCTGTCACTCGTCCTCCTAACCTTTCCATTGTTACTGAGTTTCTTCCAAGAGGAAGCTTGTACCGGATCATTCACCGCCCAAATTGTCAAATTGATGAAAGCCGCAGAATAAAAATGGCCCTTGATGTGGCAAGGGGCATGAATTGCTTGCATACAAGTAATCCAACAATTGTTCACCGAGATCTGAAGTCTCCGAATCTTTTGGTTGATAAGAACTGGAATGTAAAGGTATCAGATTTTGGGTTGTCACGCTTGAAGCACAATACATTTTTGTCATCCAAATCAACTGGAGGAACGCCTGAGTGGATGGCACCAGAAGTTCTCCGGAATGAGCCTTCAAATGAGAAGTGTGACGTTTATAGCTTTGGAATCATTCTATGGGAACTTGCTACATTGAGACTGCCTTGGAGTGGGATGAATCCTATGCAAGTTGTTGGTGCAGTCGGTTTCCAGAATCGACGACTCGAAATACCCAAGGAAGTGGATACCACGGTTGCAAGGATTATCTGGGAATGCTGGCAAACCGATCCAAACTTGCGCCCCTCATTTGCACAATTAGCCAATATTTTGAAGCCACTGCAGCGGCTCGTCATGCCGCTGCATTCGGACCAGCCGAGTTCATCGGTGCTGCAAGAGATATCTGTAAATTCTACACCTTGA 2259 42.63 MTVDHALEELVQIAQCIADCPGTEVRVLVQRLAELVMGHMGGPVKDAHFMLARWMERSTELRTSLHTSVLPIGSINIGLSRHRALLFKVLADSIKMPCRLVKGSHYTGVEEDAVNIIKLEDEREFLVDLMAAPGTLIPADILSAKDTTSIKPYNPKVSKIPSLHHYNDAGISSTKPTSLLEEGSSQNFEAEASSLVDEKLSYGRTESVPSSSGTEASRYKGAHFGDSNVRLNVNVVSLGQSSEDSKNLFEDLNPFQIKGTGKSFILNKSSDNKIEELRKTAIGHAPVPLWKNRVVFNAVPKNKEYDYMEGRFPRTNCRPNDHNIASSFSASSSVSENVNPSGSGISIDSRVSNRSAEVGSSSSNMNSRSTSTMIEPNILPLIDEQNRKLNGEYSGNIDMQDEKVDAVVGRDNLSRFDNRRKFTYDRSVGTNLILKDPGSPSTLIDPSSRSRFEQVYDDVDVGQCEIQWEDLVIGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALAEFKREVLIMRQLRHPNIVLFMGAVTRPPNLSIVTEFLPRGSLYRIIHRPNCQIDESRRIKMALDVARGMNCLHTSNPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTFLSSKSTGGTPEWMAPEVLRNEPSNEKCDVYSFGIILWELATLRLPWSGMNPMQVVGAVGFQNRRLEIPKEVDTTVARIIWECWQTDPNLRPSFAQLANILKPLQRLVMPLHSDQPSSSVLQEISVNSTP 752
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6521820 6531954 + Carg27809-RA Car10g00915 155817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00915 752 Pfam Protein tyrosine and serine/threonine kinase 472 722 IPR001245 GO:0004672|GO:0006468
Car10g00915 752 ProSitePatterns Serine/Threonine protein kinases active-site signature. 590 602 IPR008271 GO:0004672|GO:0006468
Car10g00915 752 ProSiteProfiles Protein kinase domain profile. 471 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car10g00915 752 MobiDBLite consensus disorder prediction 328 370 - -
Car10g00915 752 Pfam Ethylene-responsive protein kinase Le-CTR1 3 137 - -
Car10g00915 752 ProSitePatterns Protein kinases ATP-binding region signature. 477 499 IPR017441 GO:0005524
Car10g00915 752 MobiDBLite consensus disorder prediction 201 220 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g01146 Car-Chr8:7718281 Car10g00915 Car-Chr10:6521820 3.38E-115 dispersed
Car10g00915 Car-Chr10:6521820 Car12g00824 Car-Chr12:7932155 0 dispersed
Car10g00915 Car-Chr10:6521820 Car09g00284 Car-Chr9:1532056 8.13E-39 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89148 PF07714 PK_Tyr_Ser-Thr 3.30E-63 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00915 - - csv:101218274 1297.34