Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00919 ATGAGCTTAAACCAAGCTTCCATCTTAATCCTCTCCATTAATCCTCGATCTCGAGATTTTGCTGCTCTTAACCACAAGCCGCCTCTTCGCTTAACCAAAACGATTGGGATGGATAATAAGCAGATCGTGGTGGTTCAAAGATATGAATTAGGTAGATTACTCGGCCAAGGAACCTTTGCGAAGGTATATTATGCGAGAAATACAGAAACTAATCAAAGTGTGGCCATTAAGGTGATTGATAAAGAAAAGATCACGAAGGCTTCGCTAATAGATCAGATTAAGCGTGAAATATCTATTATGCGACTTGTTAGGCATCCTAATATTATACATCTATATGAGGTTATGGCCACCAAGACTAAGATCTACTTCGCCTTGGAATATGCTAAAGGCGGTGAGCTCTTTGACAAGGTTGCTAAAGGGAGGCTGAGGGAAGAAGTTGCTTGGAAATACTTTTATCAGTTGATCAATGCTGTTGATTTTTGTCACAGTAGGGGAGTATATCACCGTGATATAAAGCCAGAGAACCTACTTCTTGATGAAAATGAGAATCTTAAGGTGTCTGATTTTGGTTTAAGTGCTTTAGCCGAGTCCAAGCGCCAAGATGGGTTGCTACACACTACTTGTGGTACTCCAGCTTATGTTGCTCCTGAAGTCATCAATAGGAAGGGCTATGATGGTGCAAAAGCTGATATCTGGTCTTGTGGAGCAGTCTTGTTCGTCTTATTGGCAGGTTATCTACCATTCCACGATTCAAATTTAATGGAGATGTATAGGAAAATTGGAAAAGCGGACTATAAATGCCCTAGTTGGTTCCCTCGTGATGTACGTCGGCTGCTTATGAGGATGCTTGATCCAAACCCTGCTACTAGAACTTCCATAGCAATGATAAGGCAAAGTTCCTGGTTCAAAAAAGGATTGAGGTTTAAGATGTTAAGAAGTGAAACAGGAAGTGATGCTAAAGCGAGTGAAGATGCAGCAGCTGTTTCTGAAACATCAGAGAGTAGTAGTGTGTCAGCAGATGGAAGTCAAGAGCCAGATAGACCTCCGACGTTGAACGCTTTCGATATCATCTCCCTTTCTGCTGGGTTCAATCTATCCAGTTTATTTGAAGACAACTCAAAGAGGAAAGAAACATTGTTTACTTGTAGAAAACCGGCCTCTGTTATTCTCTCCAAGCTAGAAGATATTGCTAAACTTCTCAGGTTTCGGGTGCAGAAGAAGGAAGCAGGCCTACTGAAGTTCGAGGCGCTGACAGAGGGTAAAAAGGGGCCTTTGTCCATTGATACAGAGATATTTGAGATTACTCCATCCTTTTATTTGGTGGAGATGAAAAAATCCAATGGGGACACATTGGAGTATCAGAAGATATTAAAAGAGGACATAAGACCAGCTCTACAGGATATTGTATGGGTATGGCGAGCCGAGCAGGAGCAGGAGCAGCAGCAACAACAGCCTCAGCCTCCGCCTCCGCATCCGCATCAGCCTCTCGAACTGCAGGATCGGGATCCATATCTGGACCAAGAGGGTGTGTCACAACAGCAGTAG 1545 43.04 MSLNQASILILSINPRSRDFAALNHKPPLRLTKTIGMDNKQIVVVQRYELGRLLGQGTFAKVYYARNTETNQSVAIKVIDKEKITKASLIDQIKREISIMRLVRHPNIIHLYEVMATKTKIYFALEYAKGGELFDKVAKGRLREEVAWKYFYQLINAVDFCHSRGVYHRDIKPENLLLDENENLKVSDFGLSALAESKRQDGLLHTTCGTPAYVAPEVINRKGYDGAKADIWSCGAVLFVLLAGYLPFHDSNLMEMYRKIGKADYKCPSWFPRDVRRLLMRMLDPNPATRTSIAMIRQSSWFKKGLRFKMLRSETGSDAKASEDAAAVSETSESSSVSADGSQEPDRPPTLNAFDIISLSAGFNLSSLFEDNSKRKETLFTCRKPASVILSKLEDIAKLLRFRVQKKEAGLLKFEALTEGKKGPLSIDTEIFEITPSFYLVEMKKSNGDTLEYQKILKEDIRPALQDIVWVWRAEQEQEQQQQQPQPPPPHPHQPLELQDRDPYLDQEGVSQQQ 514
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6982102 6984658 - Carg11761-RA Car10g00919 155821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00919 514 ProSitePatterns Protein kinases ATP-binding region signature. 54 77 IPR017441 GO:0005524
Car10g00919 514 MobiDBLite consensus disorder prediction 475 514 - -
Car10g00919 514 Pfam NAF domain 348 406 IPR004041 GO:0007165
Car10g00919 514 MobiDBLite consensus disorder prediction 319 347 - -
Car10g00919 514 Pfam Protein kinase domain 48 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car10g00919 514 ProSiteProfiles Protein kinase domain profile. 48 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car10g00919 514 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Car10g00919 514 MobiDBLite consensus disorder prediction 327 345 - -
Car10g00919 514 ProSiteProfiles NAF domain profile. 346 370 IPR018451 GO:0007165
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00919 Car-Chr10:6982102 Car20g00276 Car-Chr20:1597906 0 dispersed
Car10g00919 Car-Chr10:6982102 Car07g01185 Car-Chr7:7195590 0 transposed
Car10g00919 Car-Chr10:6982102 Car03g00265 Car-Chr3:3839361 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89149 PF00069 Pkinase 1.10E-73 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00919 - - csv:101206404 766.148