Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car10g00921 | ATGGCCATTACCTCTAACAAAATGGCTATGGCTTTAGCAACCGTCTTATTGGCAATGCTGCTCGTGGGCAGCTCCTCGGCTCAGCTCTCTCCGAACTTCTACTACACCACGTGCCCCAAGCTCCTCGGCATTGTTAGAGCTGGTGTTCAGTCTGCTGTCGCTAAGGAAGCTCGCATGGGCGCTTCTCTTCTCCGTCTCCACTTTCACGACTGTTTTGTTAATGGTTGTGATGGATCTATTCTTCTCGAAGATACTCCTACTTTTACTGGAGAGCAAACTGCAGCTCCTAATGTTAGATCTGTTAGAGGGTTCGATGTGATTGAGAGTATAAAGAAGAATGTTGAAAAAGTTTGTCCTGGTGTTGTCTCTTGTGCTGATATTTTGACTCTTTCTGCTCGGGACTCCGTTGTAGCACTTGGAGGGCCGAGTTGGGAGGTGAAATTAGGAAGGAGAGATTCCCAAACAGCTAGCTTCTCTGATGTCGTTGGTGCCATTCCTCCGCCAACCTCTACACTCGACAGCCTTATCGACCGGTTCAACACTAAAGGCCTTTCCCCTCGAGATTTGGTTGCCTTATCTGGGGCTCACACAATCGGGCAAGCAAAGTGTTTGTTTTTCAAGAACCGTATATACAACGAGACCAACATTGATGAATCCTTCGCTGAGGAGAGACAGAGGAATTGCCCAGTAAATGGAGGAGACGATAACCGTGCTCCTCTAGACTTCGAAACTCCAAATCTCTTTGACAACTACTACTACAAGAACCTTCTAGATCAAAAGGCTCTACTCCGTTCCGATCAAGTGTTGCATGATGGTGGATCCACTGATTCCTTAGTTGAACTCTACAGTGACGACAGTGATGCCTTTGAAGCTGACTTTGTGACAGCTATGATCAAGATGGGCGACATTGAACCACTCACAGGATCACAAGGCGAGATTCGAAGCGTCTGCAGCCGACCCAATTAA | 966 | 47.31 | MAITSNKMAMALATVLLAMLLVGSSSAQLSPNFYYTTCPKLLGIVRAGVQSAVAKEARMGASLLRLHFHDCFVNGCDGSILLEDTPTFTGEQTAAPNVRSVRGFDVIESIKKNVEKVCPGVVSCADILTLSARDSVVALGGPSWEVKLGRRDSQTASFSDVVGAIPPPTSTLDSLIDRFNTKGLSPRDLVALSGAHTIGQAKCLFFKNRIYNETNIDESFAEERQRNCPVNGGDDNRAPLDFETPNLFDNYYYKNLLDQKALLRSDQVLHDGGSTDSLVELYSDDSDAFEADFVTAMIKMGDIEPLTGSQGEIRSVCSRPN | 321 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 6989501 | 6990695 | - | Carg11763-RA | Car10g00921 | 155823 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car10g00921 | 321 | ProSiteProfiles | Plant heme peroxidase family profile. | 28 | 321 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Car10g00921 | 321 | Pfam | Peroxidase | 45 | 285 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Car10g00921 | 321 | ProSitePatterns | Peroxidases active site signature. | 60 | 71 | IPR019794 | GO:0004601 | |
| Car10g00921 | 321 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 188 | 198 | IPR019793 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car01g00652 | Car-Chr1:3850259 | Car10g00921 | Car-Chr10:6989501 | 8.47E-68 | dispersed | |
| Car01g00653 | Car-Chr1:3867496 | Car10g00921 | Car-Chr10:6989501 | 2.79E-51 | dispersed | |
| Car10g00921 | Car-Chr10:6989501 | Car11g01584 | Car-Chr11:12568065 | 2.23E-120 | dispersed | |
| Car15g00167 | Car-Chr15:899937 | Car10g00921 | Car-Chr10:6989501 | 7.41E-52 | dispersed | |
| Car19g00225 | Car-Chr19:2224769 | Car10g00921 | Car-Chr10:6989501 | 6.23E-74 | dispersed | |
| Car20g00278 | Car-Chr20:1602725 | Car10g00921 | Car-Chr10:6989501 | 3.42E-96 | dispersed | |
| Car20g00281 | Car-Chr20:1617202 | Car10g00921 | Car-Chr10:6989501 | 7.65E-49 | dispersed | |
| Car10g00921 | Car-Chr10:6989501 | Car19g00799 | Car-Chr19:8649139 | 1.15E-124 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car10g00921 | K00430 | - | csv:101204245 | 563.918 |