Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00931 ATGGAGCTTCACGATTCAACACCGCCACCACCAAACCACCACATCCACACCCACAATGCTCTTCTCACCTCCAATTCCTTCCTCATCATCACCGCCTCCATCATCTTCATCGCCGTCCTCCTCGCCGTCCTCCTCCTCATCTCCATGCTCCACCGCCTCAAATTAGCTCGAGACACCGCCGCCGCCACCGCCGCCGCACAATCCACCACATTCAACCCCCACATAGCTATCAATTTCGATTCAAACCCAGAATTTAAGGGGCGTGGGTACTTATATGGAGCCAATTCTGGGAGGATTTCTAAGTATAGAATCAGGGGAGTTCAGGTTTTCACTTACAAGGAAATGGAATTGGCTACTGATCATTTTAATGAAGCTAATGTGATTGGAAATGGAAGATTTGGGATTGTTTATAGAGGAGTTCTTGATGATGGAGCTGTGGTTGCTATTATGATGATCCATAGAGATGGGAAGCAGAGGGAACGTGCGTTCAGAATGGAGGTGGATCTCCTAAGCCGCTTGCAGTCTCCATGTCTGGTGGAGTTGCTTGGCTACTGCGCTGACAAACACCATAGGCTTCTGATATTTGAATTTATGCACAACGGTACTCTTCATCATCATCTGCATAATCCGGACACTGAATCTCAGCCATTGGATTGGAATACTAGATTGACGATAGCCCTTGATTGTGCCAAGGCACTCGAGTTCCTCCACGAGCATGCCGTTCCATCTGTTATTCATAGAAACTTCAAGTCAACCAATGTTCTATTGGATCAGGATTTCCGAGCCAAGGTCTCCGATTTCGGCTCAGCCAAGATGGGTTCCGATAAGATCAATGGTCAAATATCTACACAAGTCCTCGGAACCACCGGATATCTAGCACCAGAGTATGCTTCAACAGGTAAACTTACAACAAAATCAGATGTATATAGCTATGGTGTTGTGCTACTAGAGCTTTTGACTGGTCGAGTGCCGGTTGATATCAAACGGCCACAGGGCGAGCACGTTCTTGTCTCGTGGGCTCTCCCAAGGCTGACTAATAGGGAACAAGTAGAGAAAATTATAGATCCAGCAATTCAAGGGAAGTACTCAAAAAAGGATCTAATTCAGGTTTGTTAA 1116 46.51 MELHDSTPPPPNHHIHTHNALLTSNSFLIITASIIFIAVLLAVLLLISMLHRLKLARDTAAATAAAQSTTFNPHIAINFDSNPEFKGRGYLYGANSGRISKYRIRGVQVFTYKEMELATDHFNEANVIGNGRFGIVYRGVLDDGAVVAIMMIHRDGKQRERAFRMEVDLLSRLQSPCLVELLGYCADKHHRLLIFEFMHNGTLHHHLHNPDTESQPLDWNTRLTIALDCAKALEFLHEHAVPSVIHRNFKSTNVLLDQDFRAKVSDFGSAKMGSDKINGQISTQVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDIKRPQGEHVLVSWALPRLTNREQVEKIIDPAIQGKYSKKDLIQVC 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7245935 7248887 - Carg28191-RA Car10g00931 155833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00931 371 Pfam Protein kinase domain 123 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car10g00931 371 ProSiteProfiles Protein kinase domain profile. 122 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01165 Car-Chr1:10799747 Car10g00931 Car-Chr10:7245935 4.22E-155 dispersed
Car10g00931 Car-Chr10:7245935 Car14g00853 Car-Chr14:5024085 4.60E-89 dispersed
Car10g00931 Car-Chr10:7245935 Car19g00800 Car-Chr19:8656218 4.98E-119 transposed
Car10g00931 Car-Chr10:7245935 Car11g01583 Car-Chr11:12563543 4.27E-119 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89150 PF00069 Pkinase 2.60E-42 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00931 - - csv:101210578 597.43