Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00947 ATGGGGTGTTTGGTTAGCCGAGAGGTGTCATCTAGAAATGCAGAATCCCCTGTAGATAAGGAAAGGAGAAATCAAATTACTGTAGAACATGTGAGTGCTAATGTAGAGGAGCATGTAAATGTAAACAAGGAGGAGCCGAAAGCTGATGGATGTTCGGATCGTCCACGAGCTAAACGGAGAAAGTCGAGGAAGGTTCCGAGGCCGTCGAACTTGCCAAACCATTCCCAGGGAGAGCAAGTTGCTGCTGGATGGCCTTCTTGGCTCACAGCAGTTTGTGGAGAGGCTCTCAATGGTTGGATTCCTCGGAAGGCTGATACATTTGAAAAGATTGATAAGATTGGACAAGGAACGTATAGCAATGTGTATAAAGCTAAAGATATAATTACAGGTAAAATTGTCGCACTGAAGAAGGTTCGATTCGACAATCTCGAACCTGAAAGTGTGCAGTTTATGGCTAGAGAGATTCTCATTCTTAGGAGATTAAATCATAACAATGTTGTGAAATTGGAGGGGTTGGTTACATCACGGATGTCTTGTAGTTTATACTTGGTGTTTGAGTATATGGAGCATGATTTAGCTGGTCTTGCTGCGAATCCATCGATCAAATTTACGGAATCTCAGGTGAAATGTTTCGTGCAACAACTGCTATCTGGACTGGAACACTGTCATAATCGTCGGGTGCTTCATCGTGACATTAAAGGATCTAACCTTCTCATTGATAGTGGGGGAGTGCTTAAGATAGCTGACTTTGGATTGGCTTCTATCTTTGATCCGAATCACAAGCACCCTATGACTAGTCGGGTGGTTACGTTATGGTATCGACCTCCTGAACTTCTTCTTGGAGCAACTGATTATGGAGTTGGTGTAGACCTCTGGAGTGCTGGGTGTATACTGGCTGAGTTATTAGCTGGGAGGCCTATTATGCCTGGTCGTACAGAGGTAGAGCAACTACACAAGATATACAAGCTTTGTGGCTCCCCTTCAGATGAATACTGGAAAAGAGCAAAACTTCCAAATGCAACCTTATTTAAGCCCAGAGAACCTTATAAAAGACGTATAAAGGAGACGTTTCAAGATTTCCCGCCATCTTCACTGCCGCTTATCGAAACGCTTCTTGCAATTGATCCAGTAGAACGAAAGGAAGCGACAGATGCATTAAATAGCGAGTTCTTCATGACAGAACCTTTAGCTTGCGAACCTTCCGACCTCCCGAAATATCCTCCCAGTAAGGAGATGGATGCTAGAAGACGAGATGATGAAGCTCGGAGACTAAAAGCAGCTAGTAAAGCCCAGGGAGATGGAACGAAAAAAACACGCACACGCGTTCGGGCTATTCCAGCTCCTGAAGCCAACGCCGAAATACAAACTAATATCGACAGAAGGCGCATAATTACACATGCAAATGCAAAGAGCAAAAGTGAAAAGTTCCCCCCACCACACCAGGATGGAGAGCTTGGCTATACGCTAGGACATTCGCGTCATATCGACCCATCCCGTGTTCCTTCCGACGTACCATTCAGCTCGACGACGCTTTTCACTTTTTCTAAGGAGCCACTCCAAGCCTGGTCTGGTCCACTAGTCCCTGGCTCTGGCACTGATGCTCCTACTAGACACAAGAAGCATGTAGGAGGTAAAGGCAAGAGAATCATGGTCTAA 1656 45.23 MGCLVSREVSSRNAESPVDKERRNQITVEHVSANVEEHVNVNKEEPKADGCSDRPRAKRRKSRKVPRPSNLPNHSQGEQVAAGWPSWLTAVCGEALNGWIPRKADTFEKIDKIGQGTYSNVYKAKDIITGKIVALKKVRFDNLEPESVQFMAREILILRRLNHNNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAANPSIKFTESQVKCFVQQLLSGLEHCHNRRVLHRDIKGSNLLIDSGGVLKIADFGLASIFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGRPIMPGRTEVEQLHKIYKLCGSPSDEYWKRAKLPNATLFKPREPYKRRIKETFQDFPPSSLPLIETLLAIDPVERKEATDALNSEFFMTEPLACEPSDLPKYPPSKEMDARRRDDEARRLKAASKAQGDGTKKTRTRVRAIPAPEANAEIQTNIDRRRIITHANAKSKSEKFPPPHQDGELGYTLGHSRHIDPSRVPSDVPFSSTTLFTFSKEPLQAWSGPLVPGSGTDAPTRHKKHVGGKGKRIMV 551
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 8002534 8008716 + Carg27094-RA Car10g00947 155849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00947 551 MobiDBLite consensus disorder prediction 13 27 - -
Car10g00947 551 ProSitePatterns Protein kinases ATP-binding region signature. 113 136 IPR017441 GO:0005524
Car10g00947 551 MobiDBLite consensus disorder prediction 399 440 - -
Car10g00947 551 MobiDBLite consensus disorder prediction 1 78 - -
Car10g00947 551 MobiDBLite consensus disorder prediction 527 551 - -
Car10g00947 551 MobiDBLite consensus disorder prediction 36 56 - -
Car10g00947 551 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Car10g00947 551 MobiDBLite consensus disorder prediction 406 440 - -
Car10g00947 551 Pfam Protein kinase domain 107 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car10g00947 551 ProSiteProfiles Protein kinase domain profile. 107 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00947 Car12g01072 CCT
Car10g00947 Car12g01072 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g01263 Car-Chr6:9077875 Car10g00947 Car-Chr10:8002534 0 dispersed
Car10g00947 Car-Chr10:8002534 Car11g01052 Car-Chr11:8060519 0 dispersed
Car10g00947 Car-Chr10:8002534 Car14g01474 Car-Chr14:12256152 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89151 PF00069 Pkinase 7.10E-66 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00947 K08819 - csv:101215893 999.964