Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car10g00948 | ATGACACCCATTTTGAACTATGTTGTGTCCAAATGGCAAGCGTTGTCCACTTCTGATCATGCCTCTGTGGTTTCCATCAACTTATTTGTGGCACTTCTCTGTGCTTGTATTGTGATTGGGCATCTTCTGGAGGAGACTCGATGGATGAATGAGTCGATCACTGCACTCTTGATTGGTATGTTTGCTGGAATAGTCATTTTACTGGTCAGTCGTGGGAAAAGTTCGCATTTGTTGCTTTTCAGCGAAGATACATTCTTTATTTATCTTCTGCCACCGATTATATTCAATGCGGGGTTTCAGGTGAAAAAGAAGCAGTTCTTTGTCAACTTTATGACAATTATGCTGTTTGGTGCAATTGGTACATTAGTCTCGTGTTTCATCATCTCGTTAGGAGCTTTTCAGTTCTTTAAGAAAATGGATGTTGGATCACTGGATATTGCTGATATTTTAGCGATTGGAGCTATATTTGCCGCAACGGATTCTGTATGCACGCTTCAGATATTAAGCCAGGACGAAACCCCTCTACTCTACAGTCTCGTATTTGGGGAGGGCGTGGTCAATGACGCTACGTCTGTGGTGCTTTTCAATGCTATTCAAAGCATAGATCTCAGCAACATTGATGCAAGAGTTGCTATACATTTTCTTGGGAGCTTCTTTTATCTGTTTTCGACGAGCACTCTACTCGGAGTATTTGTTGGGCTGCTGAGTGCTTATATAATCAGAAAGTTATACTTTGGCAGGCACTCGACAGATCGTGAGGTCGCTCTTATGATACTCATGGCGTATCTTTCGTATATGCTGGCTGAATTACTAGATTTGAGTGGCATTCTCACAGTGTTCTTTTGTGGAATTGTAATGTCACATTATACCTGGCATAATGTGACTGAGAGCTCAAGAGTTACCACCAAACACGCGTTTGCTACCTTATCCTTCATTTCCGAGTCATTTATCTTCGTTTATGTCGGCATGGATGCATTAGACATCGAGAAGTGGAGCTTCGTTAGTGATAGTCCGGGGACATCGGTTGCTGTGAGCGCAATGTTACTCGGCCTGGTTATGGTTGGAAGAGCTGCTTTTGTTTTTCCATTATCGTTTCTATCCAACTTAGCTAAAAAATCAGCAGACGAGAAAATTACGTTCAGGGAACAGGTTATCATTTGGTGGGCTGGTCTCATGAGAGGGGCTGTCTCCATTGCTCTAGCTTATCACCAGTTCACCAGAGCAGGGCACACTCAACTACGAGGGAATGCGATGATGATCACTAGTACCGTAACCGTTGTCCTCTTCAGCACGATGGTGTTTGGATTATTAACCAAGCCTCTTATTAAGTGTTTGATACCCCACCCGAAACTCACGACCAGCATGCTATCGGACCCTGCGACTCCAAAATCATTCTCGGTTCCGCTACTTGGAAGCGCACAAGATTCAGAGCTAGATCTTGACAGCCTCCATGTTCCTCGTCCAACGAGTATACGCGCATTCCTTGCAACTCCTACGCACACTGTGCATCGGTACTGGCGAAAGTTCGACGACGCCTTCATGCGTCCAATGTTTGGGGGTCGGGGTTTTGTTCCTTTTGTCCCAGGATCGCCAACCGAAAGGGGAGGGCATTGA | 1614 | 44.73 | MTPILNYVVSKWQALSTSDHASVVSINLFVALLCACIVIGHLLEETRWMNESITALLIGMFAGIVILLVSRGKSSHLLLFSEDTFFIYLLPPIIFNAGFQVKKKQFFVNFMTIMLFGAIGTLVSCFIISLGAFQFFKKMDVGSLDIADILAIGAIFAATDSVCTLQILSQDETPLLYSLVFGEGVVNDATSVVLFNAIQSIDLSNIDARVAIHFLGSFFYLFSTSTLLGVFVGLLSAYIIRKLYFGRHSTDREVALMILMAYLSYMLAELLDLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFISESFIFVYVGMDALDIEKWSFVSDSPGTSVAVSAMLLGLVMVGRAAFVFPLSFLSNLAKKSADEKITFREQVIIWWAGLMRGAVSIALAYHQFTRAGHTQLRGNAMMITSTVTVVLFSTMVFGLLTKPLIKCLIPHPKLTTSMLSDPATPKSFSVPLLGSAQDSELDLDSLHVPRPTSIRAFLATPTHTVHRYWRKFDDAFMRPMFGGRGFVPFVPGSPTERGGH | 537 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 8052594 | 8058112 | + | Carg27093-RA | Car10g00948 | 155850 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car10g00948 | 537 | TIGRFAM | b_cpa1: sodium/hydrogen exchanger 3 | 24 | 445 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Car10g00948 | 537 | PRINTS | Na+/H+ exchanger signature | 84 | 95 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Car10g00948 | 537 | PRINTS | Na+/H+ exchanger signature | 98 | 112 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Car10g00948 | 537 | PRINTS | Na+/H+ exchanger signature | 113 | 121 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Car10g00948 | 537 | PRINTS | Na+/H+ exchanger signature | 153 | 163 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Car10g00948 | 537 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 7 | 536 | IPR018422 | GO:0006812|GO:0015299|GO:0016021 | |
Car10g00948 | 537 | PANTHER | SODIUM/HYDROGEN EXCHANGER 2 | 7 | 536 | - | - | |
Car10g00948 | 537 | Pfam | Sodium/hydrogen exchanger family | 29 | 443 | IPR006153 | GO:0006812|GO:0015299|GO:0016021|GO:0055085 | |
Car10g00948 | 537 | Gene3D | - | 145 | 197 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car08g01079 | Car-Chr8:7346810 | Car10g00948 | Car-Chr10:8052594 | 0 | dispersed | |
Car10g00948 | Car-Chr10:8052594 | Car11g01051 | Car-Chr11:8054318 | 0 | dispersed | |
Car10g00948 | Car-Chr10:8052594 | Car18g00580 | Car-Chr18:6521603 | 1.31E-26 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car10g00948 | - | - | csv:101214934 | 962.214 |