Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00960 ATGATGGCTGGAACTAATCAAATCAATCTCAACGAAGCTAGGATGGTGGTTCCACTGAATACCTGGGTTCTCATTTCCAACTTCAAGTTGGCTTATAATCTTCTTCGTCGGCCTGATGGGACCTTCAATCGCCATTTGGCAGAGTTTCTCGACCGGAAGGTCCCTGCAAATGCTAACCCTGTTGATGGGGCTTTCTCGTTTGATGTCATTATTGATCGTGCTACGAGCCTGCTTTGTCGAATTTATCGACCTGCCAAGGGAGGGGAGCCTCAGACTACTAGCATTGTTGATCTTGAGAAGCCTGTGGATTCTGAGGTTGTTGTCCCTGTTATTGTTTTCTTTCATGGTGGAAGCTTTGCTCATTCGTCTGCTAATAGCGCTATCTATGATACGCTATGTCGTCGATTGGTTAGCCTTTGCAAGGCTGTTGTTATCTCTGTGAATTATAGGCGTGCTCCTGAAAATCGGTATCCATGTGCTTATGATGATGGATGGACTGCACTCAATTGGGTGAACTCAAGAACATGGCTTCGAAGTAAAGACTCGAAAAGCTATATCTATTTGGCTGGCGATAGTTCGGGTGGAAACATTGTACACCATGTTGCATCAAGAGCTGTGAAGTCGGGAATTGAAGTGTTTGGTAATATACTTCTTAATCCAATGTTTGGGGGACAGGAAAGAACGAAATCGGAGATTCGGTTGGATGGGAAGTATTTTGTGACCATTCGAGATAGAGATTGGTATTGGAGGGCCTTTCTCCCTGAGGGAGAAGATAGAGACCATCCAGCTTGTAATCCCTTCGGGCCGAGGGGCTATAGCCTTGAAGGAATCAAGTTCCCGAAGAGCCTTGTCGTGGTGGCTGGTTTAGATCTTGTCCAAGATTGGCAATTGGCTTATGCCAGAGGGCTGGAGAATGATGGCCAGGAGGTGAAACTTTTGTATCTTGAGCAGGCAACAATTGGCTTCTACTTATTACCGAATACCGCGCACTTCTATACTGTCATGGACGAGATAAGCGACTTCGTGAGTTCTGACTGTTAA 1041 45.73 MMAGTNQINLNEARMVVPLNTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVDGAFSFDVIIDRATSLLCRIYRPAKGGEPQTTSIVDLEKPVDSEVVVPVIVFFHGGSFAHSSANSAIYDTLCRRLVSLCKAVVISVNYRRAPENRYPCAYDDGWTALNWVNSRTWLRSKDSKSYIYLAGDSSGGNIVHHVASRAVKSGIEVFGNILLNPMFGGQERTKSEIRLDGKYFVTIRDRDWYWRAFLPEGEDRDHPACNPFGPRGYSLEGIKFPKSLVVVAGLDLVQDWQLAYARGLENDGQEVKLLYLEQATIGFYLLPNTAHFYTVMDEISDFVSSDC 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 8732848 8735445 + Carg27937-RA Car10g00960 155862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00960 346 Pfam alpha/beta hydrolase fold 111 323 IPR013094 GO:0016787
Car10g00960 346 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 111 127 IPR002168 GO:0016787
Car10g00960 346 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 186 198 IPR033140 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01158 Car-Chr1:10667875 Car10g00960 Car-Chr10:8732848 0 dispersed
Car08g00333 Car-Chr8:2156139 Car10g00960 Car-Chr10:8732848 0 dispersed
Car09g01103 Car-Chr9:11207832 Car10g00960 Car-Chr10:8732848 5.29E-72 dispersed
Car10g00960 Car-Chr10:8732848 Car17g01078 Car-Chr17:8370949 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00960 K14493 - csv:101213253 649.818