Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g00964 ATGGGTTGTGTTCTCATGATTATTATCTTCATGTCCATACCTTTTTCAACGCAGAACTCCCACATTTTGATTGCTAACTCACCATTGAATGCAGCAGAGAGCTTCGATGTTGAAGAGTTAGAGAGGGTTTCGGGGGAAGATGAGAGTCGAGGAAATGAGCCTTTCATTCTGGAGAGATTCAGAGCTCTACTTGGACTCAAGAGCTTACCATCGGATCTTTCGTTTTCGCCGTCGCCGTCGCCGTCGCCGTCTCCATCACCGGCAGCCATTGCTCCTTCCCCTGTTCATATGGCAACTCATCGAGTGCACATTCATGAGCATTCCCACCCTCATCAGCTTCGCTTGCACAAGAGACGACCAGTATACAAACCTAAAAGAGAGGAAGATGCAAGAGAAGGAAGAGTCAGAAAAATTCTTGTTGCAGTTCTTGTGTCTGCAGGAGTCACCATTTTGATATGCTCTATTATTGCCTTTTGGGTCTGCAAGAAGTTCAAAACTCAGAGAGAGGAAGCCAAGGAGAAGCTTTCTGTTAAGAGTGAAACAGTAGAGAAGTCAGCTAAACCAAATTCACCAAAATCACCAAAATCTGGCCTTGATCCGTTCGATCTCGGTATGCTTGGAATGGATGCTGAAGAAGAACAGACCCAATGTTCTGTAAGTGAAAAGGAGATATCTGTTCATAAAGAGGGGGAAAGGGGCCAAGAGATGTTAGATTCAGAATTTGATAATGTAAGTGTTTCTTCAACCAAGGAAATGATGTATGTTCATGAGGAAGATGATAGTAAATCAATACAATGCGTATCTGCTAAAGCTGATTCCTCATCTGGGGATAGAATTACTCCTGTTAAATCTTGTTCTTCTGATGATGAGGAATCATTCCATTCTTGTGGTGATTCCAATTTGTCGAATGCTCGCCTTTCAAATGCTTCAGAATCTTCTTCTGCTAATGTGATAACAAAATCTACTTGTTCAGTGCCAACTATGAACTTACCAAGTAAATTGGAAACAACACAATGTGATGATTCTAACAAACCATCAACTTCTGACCAGTCGCATATTACCCTTTCTCCTTGCAATCCAGAAAGCAAAATGCAGATGGTTTCCCTCTCTGTAGGTGGCCAAAAGAATGTCCCATCTATATCTCCGCCTCCGCCACCACCGCCGCCACCGCCGCCAATCACGGATCGCAGCTCTTTTTCCCTCTCTTCACCCTTTTCAACTGGATCTACTTCCTCATCTGCATTGTTAAGATCATCATCTCCAGCAATGTCAGATTCTTCTTCGTTATCTCAAATACCATGGAATGATCTGACATCACCTAATCCTGCTGCTAAACCTTCACTACCATCATCTTCTATCCCTCCACCCCCTTCTCCACCACCAAGTTTGAAAGCAAAGGCTTACTCTTTCAAAACTCCACCACCTCTTCCTTCCAAGCTCCCTCAATTCATGGCATTTGGAAAAGAGGGAAATTCGCGGCCCAAACTTAAGCCTCTCCACTGGGACAAAGTAAGAGCTGCACCAGATCGATCAATGGTTTGGGACAAGCTAAGATGGAGTTCATTTGAGCTAGATGAAGAAATGATTGAGTCACTATTTGGCTACAACCAACATGATTCAATGAAGAATGGTGATGCTAGCAACAAAAGCCCTTCTCCAACCAAGCATATACTAGAGGCAAAGAGACTTCAGAACCTAACCATTCTCTTAAAAGCCCTGAATCTCTCTACAGAACAAGTTTGTGAAGCCATAGAACAAGGGACGGGGATGCGTTTGAGACAACTTGAAGCACTGGTGAAGATGGTACCAACACAGGAAGAAGAGGCCAAATTGTTAAGCTATGAAGGAAACATCGGTGAATTGGGGTTTACAGAAAATTTTGTGATATCAATTCTGAAAATACCATTCGCCTTCCAACGAGTAGAAGCCATGCTTTACAGAGAAACTTTTGAAGATGAAGTGAATCATCTCCGGAATTCGTTTTCCATACTAGAGGAAGCCTGTAAGGAGCTAAAATCGAGCAGGCTCTTCCTGAAACTACTGGAAGCGGTGCTAAAAACAGGGAACCGAATGAACGTCGGAACAAGCAGAGGAGGCGCAAGAGCATTCAAACTAGACGCACTCCTAAAACTATCCGACGTCAAAGGAACCGACGGAAAAACCTCCCTACTCCACTTCGTAGTGCAAGAAATGATCCGATCAGAAGGAATCAGAGTGTCCGGTAGCATAATGGGGAAAATCAGCCAAAAAAACAAATCGAGAACAATAGAAGAAAGAGAGAACGATTACCGAAGAATGGGATTAGATCTGGTGTCCGGCCTGAGCACGGAATTGCACAACGTGAAGCGAGCGGCAACGATCGATCTGAAAGTTGTTGCAAGCTTGAGGGGGAATCTGAACGACGGAATGGCGAAACTGCAAAAACTGGTGGGGAAGGAGTTGAGCGTGGATGAAAGGAGCGGGAATTTCGTAGGCGCCATGAAGGGATTCATGAGCTACGTGAAGAAGACGATGGAGGAGGTGAGGAAGGACGAAGAAGGGGTGATGTCGAGCGTGAGGGAAATCACAGAGTACTTCCATGGAAATGTGAGCAAAGAGGAGACAAATCCGCTGAGGATATTTGTGATTGTGAGAGATTTTCTTGGAATGTTGGACAGTGTTTGTAAGAGCTTCAAGATTGGAAGTTCATAG 2691 44.22 MGCVLMIIIFMSIPFSTQNSHILIANSPLNAAESFDVEELERVSGEDESRGNEPFILERFRALLGLKSLPSDLSFSPSPSPSPSPSPAAIAPSPVHMATHRVHIHEHSHPHQLRLHKRRPVYKPKREEDAREGRVRKILVAVLVSAGVTILICSIIAFWVCKKFKTQREEAKEKLSVKSETVEKSAKPNSPKSPKSGLDPFDLGMLGMDAEEEQTQCSVSEKEISVHKEGERGQEMLDSEFDNVSVSSTKEMMYVHEEDDSKSIQCVSAKADSSSGDRITPVKSCSSDDEESFHSCGDSNLSNARLSNASESSSANVITKSTCSVPTMNLPSKLETTQCDDSNKPSTSDQSHITLSPCNPESKMQMVSLSVGGQKNVPSISPPPPPPPPPPPITDRSSFSLSSPFSTGSTSSSALLRSSSPAMSDSSSLSQIPWNDLTSPNPAAKPSLPSSSIPPPPSPPPSLKAKAYSFKTPPPLPSKLPQFMAFGKEGNSRPKLKPLHWDKVRAAPDRSMVWDKLRWSSFELDEEMIESLFGYNQHDSMKNGDASNKSPSPTKHILEAKRLQNLTILLKALNLSTEQVCEAIEQGTGMRLRQLEALVKMVPTQEEEAKLLSYEGNIGELGFTENFVISILKIPFAFQRVEAMLYRETFEDEVNHLRNSFSILEEACKELKSSRLFLKLLEAVLKTGNRMNVGTSRGGARAFKLDALLKLSDVKGTDGKTSLLHFVVQEMIRSEGIRVSGSIMGKISQKNKSRTIEERENDYRRMGLDLVSGLSTELHNVKRAATIDLKVVASLRGNLNDGMAKLQKLVGKELSVDERSGNFVGAMKGFMSYVKKTMEEVRKDEEGVMSSVREITEYFHGNVSKEETNPLRIFVIVRDFLGMLDSVCKSFKIGSS 896
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 9110351 9114200 - Carg27900-RA Car10g00964 155866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g00964 896 MobiDBLite consensus disorder prediction 172 200 - -
Car10g00964 896 Pfam Formin Homology 2 Domain 488 884 IPR015425 -
Car10g00964 896 MobiDBLite consensus disorder prediction 105 128 - -
Car10g00964 896 MobiDBLite consensus disorder prediction 269 297 - -
Car10g00964 896 ProSiteProfiles Formin homology-2 (FH2) domain profile. 486 896 IPR015425 -
Car10g00964 896 MobiDBLite consensus disorder prediction 378 395 - -
Car10g00964 896 MobiDBLite consensus disorder prediction 396 446 - -
Car10g00964 896 MobiDBLite consensus disorder prediction 447 463 - -
Car10g00964 896 Coils Coil 647 667 - -
Car10g00964 896 MobiDBLite consensus disorder prediction 325 377 - -
Car10g00964 896 MobiDBLite consensus disorder prediction 105 121 - -
Car10g00964 896 MobiDBLite consensus disorder prediction 325 471 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car05g01054 Car10g00964 CCT
Car10g00964 Car11g00952 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01894 Car-Chr4:11087285 Car10g00964 Car-Chr10:9110351 1.21E-118 dispersed
Car10g00964 Car-Chr10:9110351 Car16g00567 Car-Chr16:3586045 5.01E-110 dispersed
Car19g00146 Car-Chr19:1276446 Car10g00964 Car-Chr10:9110351 5.37E-115 dispersed
Car04g00285 Car-Chr4:1601428 Car10g00964 Car-Chr10:9110351 1.04E-103 transposed
Car10g00964 Car-Chr10:9110351 Car11g00952 Car-Chr11:6191174 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g00964 - - bhj:120070661 1363.59