Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g01000 ATGAGTCAGACAGAAGTATCAAGGATTAAGCCCCCTCTCGTTCCGCTCGCTACTTTGATCGGTCGCGAGCTGAGGAACGAGAAGGTTGAGAAACCTTTTGTGAAGTATGGACAGGCTGCTTTGGCAAAGAAAGGGGAGGACTACTTTCTGATCAAATTAGATTGCCAGCGTATTCCTGGGAACACTTCCACCACGTTTTCTGTCTTTGCGATTTTTGATGGACATAATGGCATTTCAGCGGCTATTTTTGCTAAGGAACATTTATTGGGTAATGTCCTAAGTGCAATTCCTCAAGGGGTCAGTCGAGAAAAATGGCTTCAAGCCCTTCCTCGAGCACTAGTTGCTGGTTTTGTTAAAACTGACATAGAGTTTCAGCAGAAAGGGGAAACTTCTGGGACTACTGTTACATTTGTTGTGATTGATGGGTGGACTGTTACCGTTGCATCCGTGGGAGATTCACGGTGCATATTAGACACCCAAGGAGGTGTGGTTTCTCTATTGACAGTTGATCATAGGCTGGAGGAAAACGAGGAAGAGAGGGAACGTGTAACTGCAAGTGGTGGCGAGGTTGGGAGGCTCAATGTTTTTGGCGGGAATGAGGTCGGTCCTCTCCGCTGCTGGCCCGGTGGCTTATGTCTGTCTAGGTCCATTGGTGATACAGATGTAGGAGAATATATTGTCCCAATACCGCATGTTAAGCAAGTGAAGCTTTCTAATGCTGGTGGAAGGCTGATTATTGCTTCTGATGGTATTTGGGACACATTATCGTCTGATATGGCTGCAAAGTCGTGTCGAGGTTTACCTGCAGAGCTCGCTGCCAAGCTGGTTGTGAAGTGTAGGAGGCTTTACGGTCAAGGGGGTTGA 864 47.22 MSQTEVSRIKPPLVPLATLIGRELRNEKVEKPFVKYGQAALAKKGEDYFLIKLDCQRIPGNTSTTFSVFAIFDGHNGISAAIFAKEHLLGNVLSAIPQGVSREKWLQALPRALVAGFVKTDIEFQQKGETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENEEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEYIVPIPHVKQVKLSNAGGRLIIASDGIWDTLSSDMAAKSCRGLPAELAAKLVVKCRRLYGQGG 287
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 9694805 9698903 + Carg27004-RA Car10g01000 155902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g01000 287 Pfam Protein phosphatase 2C 63 265 IPR001932 -
Car10g01000 287 ProSiteProfiles PPM-type phosphatase domain profile. 32 287 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g01000 Car11g01047 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g01000 Car-Chr10:9694805 Car11g01047 Car-Chr11:7986940 0 dispersed
Car10g01000 Car-Chr10:9694805 Car18g00925 Car-Chr18:9998470 2.17E-153 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g01000 - - csv:101219622 529.25