Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g01003 ATGGCGTCTTTCATAAAGCCAGAGAATGCTTTAAAACGAGCTGAAGAGCTGATAAATGTTGGCCAGAAGCAAGATGCCTTGCAAGCCCTTCACGATCTTATAACTTCAAAGAAATATCGAGCATGGCAGAAACCTCTTGAGAGGATTATGTTCAAGTATGTTGAGCTCTGTGTGGACATGAGGAAAGGAAGGTTTGCTAAGGATGGTTTAATTCAATACCGTATTGTTTGCCAGCAAGTCAATGTTACTTCTTTAGAGGAAGTAATCAAGCACTTTATGCATCTTTCCACTGAGAAGGCAGAGCAGGCTCGTAGCCAAGCTCAAGCTTTAGAAGAAGCTCTGGATGTTGATGATTTGGAAGCTGATAAAAGGCCAGAAGATCTGATGCTTAGTTATGTCAGTGGTGAGAAGGGAAAGGATAGATCTGATCGTGAACTTGTTACCCCTTGGTTTAAATTTCTGTGGGAGACATATCGTACAGTTCTTGAGATACTTAGGAATAACTCAAAGTTGGAGGCACTTTATGCGATGACAGCCCATCGTGCCTTCCAGTTCTGTAAGACGTATAAAAGAACAACAGAATTTCGCCGATTATGTGAAATTATCAGAAATCATCTTGCTAATCTCAACAAGTATAGAGACCAAAGAGATCGTCCTGACATTTCTACTCCAGAGACCTTGCAATTGTACCTTGACACGAGATTTGAACAACTGAAGGTTGCCACAGAGCTTGAGCTCTGGCAGGAAGCTTTTCGTTCGGTGGAAGATATTCATGGTTTGATGTGCATGGTGAAGAAAACACCAAAACCATCCTTGATGGTGGTTTATTACGTCAAATTAACAGAGATATTCTGGATATCGAAGAGCAATCTTTATCATGCCTATGCTTGGCTTAAACTTTTCTCCCTTCAGAAGAGTTTCAACAAAAATTTAAGCCAGAAGGATTTGCAGCTGATAGCTTCATCTGTTCTTTTAGCAGCTCTTGCTGTGTCCCCCTATGACTCTAAACATGGTGCTTCTCATTTAGAACTTGAACATGAGAAAGAGCGGAATTTGAGGATGGCTAATCTTATAGGGTTCAATTTAGACTCCAAACTTGAAAGTAGAGATGTGCTTTCAAGAGCGAATCTTCTTTCTGAACTGGTGTCTAAGGGAGTCCTGAGCTGCGCAACTCAGGAAGTTAAAGATCTCTATCATCTTTTGGAGCATGAATTCTTCCCTCTTGATCTTGCAACAAAATTGCAACCTTTACTAAACAAAATATCAAAGCTTGGAGGCAAGCTTTCATCAGCTTCATCTGTCCCTGAAGTGCAATTGTCCCAGTATGTTCCGGCTCTTGAAAAACTTGCTACCCTGAGGTTGCTTCAGCAGGTCTCCAAGGTGTATCAGACTATGAAAATTGAGAGTCTATCTCAAATGATCCCATTTTTTGATTTCTCGGCCGTGGAGAAAATATCAGTTGATGCAGTTAAACAAAATTTCATTGCCATGAAAGTTGATCATTCAAGGAACATTGTGTTATTTGGCACTTTGGGTATTGAATCAGATGGGCTTCGGGACCACCTGGCTGTTCTCGCTGAATCCTTAAACAAAGCAAGAGCTATGATCTATCCTCCAGTTAGGAAAGTATCAAAAACAGGTGAGATACTGCCTGATTTGGCAGATATTGTTGATAAAGAACACAAGAGGCTGCTTGCTCGGAAATCAATAATAGAGAAAAGGAAGGAAGAGCAGGAACGACAACTTTTGGAAATGGAACGTGAGGAGGAATCAAGGAGGTTAAAATTACTGAAGATAACAGAAGAGGCCGAGCAGAAGCGCCTAGCTGCAGAATATGAACAAAGGAAAAACCAACGCCTGCGTAGGGAAATGGAAGAGCGAGAACTTGAAGAAGCACAGGCTTTACTTCAGGAAGCTGAAAAGCGTGTTGGTAAAAAGAAGGGAAGCAGGAAGCCGGTTCTTGACTCTGAAAAGATGACGAAACAAACTTTAATGCAATTGGCCCTTACGGAACAATTAAGGGAGAGGCAGGAAATGGAGAAGAAATTGCAAAAGCTAGCCAAAACTATGGATTATCTAGAAAGGGCAAAAAGAGAGGAGGCTGCAACTTTAATTGAAGCTGCATTTCAGCAACGTTTGCTCGAAGAGCGAATGATTCATGAACGTGATCAGCAGCTGGAGGTTGAGTTAAGCAAGCAACGCCACGAAGGTGATCTCAAGGAGAAGAATCGATTGGCTAGAATGTTGGAGAGTAAGAAAATTTTCCAAGAAAGAGTCATTAATCTTCGCCAAGAGGAGTTCAGCAGACGCAGAGTTGAGAGAGAAGAACAAATCAGGCAAATAATTCATGCTCGGAAAGCAGAAAGGGAGGCTAAGAGGAAGAAAATCTTCTATGTAAGGCGTGAGGAGGAGAGGATTCGAATATTACGCGAAGAGGAGGAAGCACGCAAACGTGAAGAGGCCGAGAGGAGAAAGAGGGAAGAGGCTGAACGCAAGGCTAAATTGGATGAGATTGCTGAGAAGCAGAGACAGAGGGAGCGAGAACTGGAAGAAAAGGAAAGGCGGCGGAAAGAAATGCTCTTTGGTGGTGGGGCACCAGCTGATGCACCTTCTAGACCATATGTTTCTCCTGTTTCTCAACCTCTGGAGTCCGGGGCTGCTGCTGCTCCTGCTGCTGCAGCTGCTGCTGCCGCCGCCCCAGCCCCAGCGAAGTATGTGCCTAGGTTTCGACGTACTGAAAGCTCTAGCCCTAATGCACCACCACCTGAATCTGATCGATGGGGAAGCAGCAGGTCCGATAATCGACCATCTCAACCAGACAGCTGGCGCAGTGATGAACGCAGATCTGCTTTCGGAAGTTCAAGGTCGTCCTGGTCGTCATCCCGAGGTCCTAATCGTGGTAGCTCGGATCGCTGA 2916 43.9 MASFIKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDMRKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKTYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDISTPETLQLYLDTRFEQLKVATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISKSNLYHAYAWLKLFSLQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGFNLDSKLESRDVLSRANLLSELVSKGVLSCATQEVKDLYHLLEHEFFPLDLATKLQPLLNKISKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFSAVEKISVDAVKQNFIAMKVDHSRNIVLFGTLGIESDGLRDHLAVLAESLNKARAMIYPPVRKVSKTGEILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLLKITEEAEQKRLAAEYEQRKNQRLRREMEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKMTKQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERMIHERDQQLEVELSKQRHEGDLKEKNRLARMLESKKIFQERVINLRQEEFSRRRVEREEQIRQIIHARKAEREAKRKKIFYVRREEERIRILREEEEARKREEAERRKREEAERKAKLDEIAEKQRQRERELEEKERRRKEMLFGGGAPADAPSRPYVSPVSQPLESGAAAAPAAAAAAAAAPAPAKYVPRFRRTESSSPNAPPPESDRWGSSRSDNRPSQPDSWRSDERRSAFGSSRSSWSSSRGPNRGSSDR 971
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 9708442 9717259 - Carg27008-RA Car10g01003 155905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g01003 971 Coils Coil 669 699 - -
Car10g01003 971 Coils Coil 603 649 - -
Car10g01003 971 MobiDBLite consensus disorder prediction 815 971 - -
Car10g01003 971 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 946 IPR027512 GO:0005852
Car10g01003 971 Pfam PCI domain 374 509 IPR000717 -
Car10g01003 971 Coils Coil 799 858 - -
Car10g01003 971 Coils Coil 732 752 - -
Car10g01003 971 MobiDBLite consensus disorder prediction 911 937 - -
Car10g01003 971 Coils Coil 561 600 - -
Car10g01003 971 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Car10g01003 971 MobiDBLite consensus disorder prediction 815 861 - -
Car10g01003 971 Coils Coil 93 120 - -
Car10g01003 971 MobiDBLite consensus disorder prediction 951 971 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g01003 Car-Chr10:9708442 Car11g01048 Car-Chr11:7996642 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g01003 K03254 - csv:101209344 1499.57