Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g01005 ATGGATTCCGGTAGGTTTCAGCCGTTTGTCTCTCTCTCCGCCGCCTTGGCTCGCCCGGATTTCGCCGGAGGTTCAACTCGGGGAAGAACGACGAGCACAAGAAACCGACCATACCTCGAAAAGGCAATGGAGCACTTGTTCATGAAGCTCAAGAAATGGAAGAACTCTGAAAATGCTTCTGCTGCTGAAGCAATGGCAAAGTCTGCAAAGAAGAAGGATTTGATCATTCGTGGCTCGGGGACTATACATATCGACGGTTCAAGCAACTTCGTTAGAGAATCAATGCCAATAGCTTTGCTCTACAATTGGCAAGAAGCACTTGTTCAAGCTTCTCTTCACTCACATTTGGAACTCAACTTAGCCAAAACACATCTAAAGTTCAATTTATGGGAGCATTCTTATATACAAGCTTGTGCTATGGTGGATCGAGAGCTCGAACGACACCAGGAGGCCGAGAGGATAGCACAATGCAACGGGCGGGTTTTCTGCTTGCAAGATGAACCCGGGACGCACCGTATTTGGTTGCCGAACGGGGAAACGCCGGGGCTATCATTGTCGAGATCGTTCGGAGATTTTTGTGTTAAGCATTTCGGTCTCATTTCCATGCCTGATGTAACACAAAGAAGTGTAACCAACCAAGACTTGTTTGTTGTACTTGCAACAGATGGGATATGGGACGTGGTGTCGAATCAAGAGGCGGTACAAATCGTACATTCGACCGTCGATAGAGAAAAATCAGCTCGACGTCTAGTCGATTATGCTACCGGTGCATGGAAGCGGAGGAGGCCGGGAATTGCAGCGGACGACATGTCGGTTATTGTCCTCTTTCTCCATTCTTCACCTTTGCATCATTAA 855 47.72 MDSGRFQPFVSLSAALARPDFAGGSTRGRTTSTRNRPYLEKAMEHLFMKLKKWKNSENASAAEAMAKSAKKKDLIIRGSGTIHIDGSSNFVRESMPIALLYNWQEALVQASLHSHLELNLAKTHLKFNLWEHSYIQACAMVDRELERHQEAERIAQCNGRVFCLQDEPGTHRIWLPNGETPGLSLSRSFGDFCVKHFGLISMPDVTQRSVTNQDLFVVLATDGIWDVVSNQEAVQIVHSTVDREKSARRLVDYATGAWKRRRPGIAADDMSVIVLFLHSSPLHH 284
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 9726643 9731905 - Carg27010-RA Car10g01005 155907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g01005 284 ProSiteProfiles PPM-type phosphatase domain profile. 1 277 IPR001932 -
Car10g01005 284 Pfam Protein phosphatase 2C 142 254 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g01005 Car-Chr10:9726643 Car12g01007 Car-Chr12:10047018 8.00E-16 dispersed
Car10g01005 Car-Chr10:9726643 Car05g00962 Car-Chr5:9206584 2.73E-71 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g01005 - - bhj:120072181 283.878