Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g01016 ATGGATGCGATTGCTTCGAACTTAGAAGAGTCGAGAAGTTCTGATTTCACGGAGCAGCGGCCGAGGAAACGCCGAAAAATCGAATCGGAGAATCAAGCGGCGGAGATTTGTAGCGCCAGATCTACGGATTTAAAAAGACGGTGGAGAACAGAGTCGGAGCAACAGATTTACTCTTCGAAACTAGTCGAGGCACTTCACCGCGTAACTCGGAGAACCGCATCGCCGCCAGCGAAATCTTCGATCAACGGCCGAAAAGTCCGCGAGACGGCGGACACAGTCCTTGCCGTTGCCGCCAAAGGCAAGACTCGCTGGAGCAGAGCCATCCTGACGAATCGGCTCGAACTCAAACTCAAGAAGCACAAGAAGGCGAAGCCGGCTGGAAACTGTTTCCGGCCGAAGAAAGTGAAAATTAGGTACGAGACGAGAAAATTGCCGACGGTACAGAGGAAAGTTCAAACTCTCGGCCGCCTGGTTCCCGGCTGCCGTAAAATCTCATTCCCGAACCTCCTTGACGAAGCTACGGATTATATCGCCGCTCTACAGATGCAGGTCCGCGCCATGACAGCCGTCGCCGAGCTTCTCGCCGGCACTCCGGCTGATCAACAACAAAGCTTCAGAACAAATTCGTAG 630 53.49 MDAIASNLEESRSSDFTEQRPRKRRKIESENQAAEICSARSTDLKRRWRTESEQQIYSSKLVEALHRVTRRTASPPAKSSINGRKVRETADTVLAVAAKGKTRWSRAILTNRLELKLKKHKKAKPAGNCFRPKKVKIRYETRKLPTVQRKVQTLGRLVPGCRKISFPNLLDEATDYIAALQMQVRAMTAVAELLAGTPADQQQSFRTNS 209
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 10105771 10106400 + Carg27527-RA Car10g01016 155918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g01016 209 MobiDBLite consensus disorder prediction 13 31 - -
Car10g01016 209 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 131 180 IPR011598 GO:0046983
Car10g01016 209 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g01333 Car-Chr6:9562395 Car10g01016 Car-Chr10:10105771 6.81E-42 dispersed
Car08g01152 Car-Chr8:7741711 Car10g01016 Car-Chr10:10105771 2.88E-47 dispersed
Car10g01016 Car-Chr10:10105771 Car12g00973 Car-Chr12:9812667 1.99E-61 dispersed
Car10g01016 Car-Chr10:10105771 Car11g01037 Car-Chr11:7804188 5.62E-100 wgd
Car10g01016 Car-Chr10:10105771 Car11g01037 Car-Chr11:7804188 5.62E-100 wgd
Car10g01016 Car-Chr10:10105771 Car05g00940 Car-Chr5:9063250 1.29E-64 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g01016 - - csv:101222379 267.7