Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car10g01038 | ATGGATAAACGGAGTTACAGTAGTAGACTGGAAACAAACAACCCAAATAAAGCCTATGCAAAGGAGCAGGATTCTCTTGGTGATGACTTCATAGATGATTTTCGCTTGCCCATCAACCATAGACCAACAGAAAATGTTGATCTTGATAATGTGGAACAAGCATCGTTGGACACTCAATTAACTTCATCAAATGTGGGCTATAGGCTTCTCCAGAAGATGGGCTGGAAAGGGAAGGGACTAGGAAAGGACGAGCAAGGAATTATTGAGCCCATTAAATCTGGAATTAGAGATCCCAAACTAGGAATTGGAAAACAAGAAGAAGACGATTTTTTCACTGCAGAGGAAAACATCCAGCGGAAAAAACTTGATGTTGAGATGGAAGAGACAGAAGCAGATGTGAAAAAACGGGAGGTATGTTATTTTTATCTTACAGTTGGTTGGGAAAAATGA | 450 | 40.0 | MDKRSYSSRLETNNPNKAYAKEQDSLGDDFIDDFRLPINHRPTENVDLDNVEQASLDTQLTSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQRKKLDVEMEETEADVKKREVCYFYLTVGWEK | 149 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 10537109 | 10541370 | - | Carg27815-RA | Car10g01038 | 155940 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car10g01038 | 149 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
| Car10g01038 | 149 | Pfam | G-patch domain | 63 | 103 | IPR000467 | GO:0003676 | |
| Car10g01038 | 149 | ProSiteProfiles | G-patch domain profile. | 62 | 107 | IPR000467 | GO:0003676 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car10g01038 | Car-Chr10:10537109 | Car18g00749 | Car-Chr18:8556381 | 1.57E-09 | dispersed | |
| Car10g01038 | Car-Chr10:10537109 | Car10g01040 | Car-Chr10:10561300 | 5.39E-35 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car10g01038 | - | - | cmax:111467909 | 275.018 |