Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car10g01047 ATGTTCAAGCCTTTGCTCCTTCTGTTTCTCTTAGCACTGTCTTTTACCAAATGGGTTCACGCCTTAAACCCCTACAATCTCTCTGATTCTTCTCTCTTCGACTCTTATGAAACTTCCTTTGCTGCTACCCTTACTCCTCTCATGGTTGGACTCACTCTCATTCAAGGAGCAGATACAAAACAAGCAGTCTGTTTGGATGGCACTTTGCCAGGATATCACCTGCATCGTGGATATGGGTCAGGAGCAAAAAGCTGGCTTCTTCAATTGGAGGGAGGTGGATGGTGTAACAATATCAGGAATTGTGTCTATCGGAAAACAACAAGGCGTGGCTCGTCAAAATTTATGGAGAAGCAGATACCATTTACAGGAATTCTGAGTAACAAAGCTGAAGAAAATCCTGATTTTTTTAATTGGAACAGAGTGAAGGTTCGTTACTGTGATGGCGCCTCTTTTACTGGGGATTCAGAAAACAAGGCTGCACAGTTGCAATTTAGAGGACAGCGGATTTGGATGGCTGCTATGGAAGCATTGAAGGCCGAGGGAATGCGTTTTGCTGAACAGGCCTTGCTTTCTGGATGCTCTGCTGGAGGTTTGGCATCTATTTTACACTGTGATGAGTTTCGAGACTTATTTCCACAAGCTACTAAAGTGAAATGTCTGAGTGATGCTGGATTATTCCTTGATGTGACTGATATATCTGGAGGCCACTACATTAGAAACTTATTTGGTGGTGTGGTGGGCTTGCAGGTACAAAGGAGCAGGAGTGAATCTGCCATCCTTCTGTATGAACCATCTCGATCCAACTTCGGTAATTCTTTCCATTCCTACTTTGGTAGTCCCAATATTATTGAAAACTTCACGTTGATAAATCACTTTGTGTTCCTCATAATTACTCAGTGTTTCTTCCCACAAAATTTAATTGCTGGAATCAAAACCCCACTGTTTCTAGTGAACGCAGCATACGATTCCTGGCAGCTACAATCTAGTATAGCTCCACCTTCTGTGGATCCGGCTGGGCAATGGCACGATTGTAGGCTGAATTATGCAAAATGTAGCCAACCTCAGATTCAATTTCTTCAAGGATTCAGGAACCAAATGTTGGATGCTGTTCGGGATTTCTCAAAATCTTCAGAAAATGGGTTATTTATTAATTCATGCTTTGCTCACTGCCAATCTGAGAGACAGGATACATGGTTCGGCGACAATTCTCCTGTCATCGGAAACAAGCCAATTGCTCTGGCCGTTGGAGATTGGTACTTCGACCGAGCAGCAGTGAAAGCAGTTGACTGCCCTTATCCTTGCGACACGACCTGCCACCATCTGGTTTTCAGAGCCGCTTAG 1341 43.77 MFKPLLLLFLLALSFTKWVHALNPYNLSDSSLFDSYETSFAATLTPLMVGLTLIQGADTKQAVCLDGTLPGYHLHRGYGSGAKSWLLQLEGGGWCNNIRNCVYRKTTRRGSSKFMEKQIPFTGILSNKAEENPDFFNWNRVKVRYCDGASFTGDSENKAAQLQFRGQRIWMAAMEALKAEGMRFAEQALLSGCSAGGLASILHCDEFRDLFPQATKVKCLSDAGLFLDVTDISGGHYIRNLFGGVVGLQVQRSRSESAILLYEPSRSNFGNSFHSYFGSPNIIENFTLINHFVFLIITQCFFPQNLIAGIKTPLFLVNAAYDSWQLQSSIAPPSVDPAGQWHDCRLNYAKCSQPQIQFLQGFRNQMLDAVRDFSKSSENGLFINSCFAHCQSERQDTWFGDNSPVIGNKPIALAVGDWYFDRAAVKAVDCPYPCDTTCHHLVFRAA 446
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 10771138 10775249 - Carg27767-RA Car10g01047 155949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car10g01047 446 Pfam Pectinacetylesterase 46 423 IPR004963 GO:0016787
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g01047 Car11g01011 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00555 Car-Chr4:3139987 Car10g01047 Car-Chr10:10771138 2.13E-137 dispersed
Car10g01047 Car-Chr10:10771138 Car11g01011 Car-Chr11:7073542 0 dispersed
Car10g01047 Car-Chr10:10771138 Car16g00460 Car-Chr16:2922427 7.42E-139 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car10g01047 K19882 - csv:101218273 738.413