Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00003 ATGGATCCAGAAGCCCTCTCCGCCACTTTGTTCAAATGGGATCCTCGAGGAATGGTGGGGGGAGGCGGCGGCGCATCCCTCCCAGCACCACTGCCGCCCTACTCGCTGCGGCCCAGGGAATTGGGACTGGGAGGCCTGGAGGAGTTGTTCCAGGCTTACGGGATCAGGTACTACACCGCCGCTAAAATTGCGGAACTGGGATTCACCGTCAGCACCCTCCTGGACATGAAAGACGAAGAGTTGGAGGATATGATAAACAGCCTCTCTCATATTTTCCGGTGGGAGCTTCTGGTAGGTGAGAGATACGGAATTAAGGCTGCTGTAAGAGCCGAGCGCAGACGTGTAGATGACGAGATGGATTCCTCCAGGCGCCGGCACCTCTTCTCCAATGACACCCATAACAACGTGGTCCTGGATGCCCTTTCCCAGGAAGGGCTTTCGGAAGAGCCGGTGCAGCAGGAAAAAGAGGTGGTGGGGAGCGGAGGAGGAGGAACTTGGGAGGCAGTTGCAGCGGGTGAGATGAGGAAGAAGCAGCGGAAGAGAAACGGATCAAAGAAGAAGCAGGTGATGGTGATGGAGGAGGATCATCACGATGAAACTGAGGAGGGAGGTGGGGAGGAGGAGGATAATATGGAAGTCAGCGAGAGACAGCGGGAGCATCCATTCATCGTAACCGAGCCAGGGGAGGTTGCACGGGGGAAAAAGAACGGCCTTGACTATCTCTTCCACCTATATGAGCAGTGTCGTGAGTTTTTGATCCAAGTCCAGAACATTGCCAAGGAACGAGGAGAAAAATGTCCCACTAAGGTGACAAACCAGGTGTTTAGATATGCGAAGAAGGTGGGAGCAAGTTACATAAACAAGCCAAAAATGAGACACTACGTGCACTGCTATGCGTTGCATTGTCTGGACGAGGAAGCGTCCAACGCGTTGAGGAGGGTTTTCAAAGAGAGGGGTGAAAATGTGGGAGCTTGGCGACAGGCATGCTATAAGCCTTTGGTAGCCACAGCAGCTGCCCAAGGTTGGGACATCGATGCCATTTTCAACGCACATCCACGCCTCGCCATCTGGTATGTGCCCACTAAACTCCGCCAACTCTGCCACGCCGAGCGCAACAGTGCCAAAGCCTCCACCTCCGCCGCCGTAAATCACTTGCCATTTTAA 1164 54.3 MDPEALSATLFKWDPRGMVGGGGGASLPAPLPPYSLRPRELGLGGLEELFQAYGIRYYTAAKIAELGFTVSTLLDMKDEELEDMINSLSHIFRWELLVGERYGIKAAVRAERRRVDDEMDSSRRRHLFSNDTHNNVVLDALSQEGLSEEPVQQEKEVVGSGGGGTWEAVAAGEMRKKQRKRNGSKKKQVMVMEEDHHDETEEGGGEEEDNMEVSERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKERGEKCPTKVTNQVFRYAKKVGASYINKPKMRHYVHCYALHCLDEEASNALRRVFKERGENVGAWRQACYKPLVATAAAQGWDIDAIFNAHPRLAIWYVPTKLRQLCHAERNSAKASTSAAVNHLPF 387
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 14837 16670 + Carg24565-RA Car11g00003 155956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00003 387 MobiDBLite consensus disorder prediction 172 216 - -
Car11g00003 387 MobiDBLite consensus disorder prediction 145 164 - -
Car11g00003 387 Pfam Floricaula / Leafy protein SAM domain 43 118 IPR035079 -
Car11g00003 387 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 212 374 IPR035209 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00006 Car11g00003 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00006 Car-Chr10:29840 Car11g00003 Car-Chr11:14837 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4213 PF17538 C_LFY_FLO 1.40E-107 CL0123 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00003 - - cmax:111484867 664.84