Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00027 ATGGCGGACGTGATGCTGATGAAAGAGATCGAGGACACGGCTGGTCGGCTTGGGATAGATCTTTCCCAAGTTGATTTTGAGTCTATTCGTCTCCCTCCCGGCGAAGATTTTGGAATCATTAGTGATGATGAAGAGGTTCTACAGGAGGAGAGTCTAGAGTTTGATTCTGGGTTCGGAAACATTATAGTTGTTGGCAATCTTCCGGTTGTTCCTTCGGAGAAGTTTGAGAAGCTCGAAGGTGTTGTTCGTAAAATTTTTGGACAGATTGGAGTTATCAAGGATGATGGCCTATGGATGCCTGTTGACCCTACTACACAGAAAACTTTAGGCTACTGCTTTATTGAGTATGGCACTCCACAGCGTTCAGAAAGTGTGTCATTGAATGATATTGTGATATTTTGGATTTCCACTAGACATGAGGCTGAGCTTGCCAAAGAGAAGACTGATGGGTACAAGTTGGATAGAGCACATATTTTCGCTGTTAATATATTTATGAAAGTACCAGACAAGTGGGCTCCTCCTGAAAGTAACCCATATACTCCGGGGGAAAATCTTCAACAGTGGCTTATGGATGAAAAAGCACGGGATCAGTTAGTTATTCGTTCTGGTTCTGATACTGAGGTCTTCTGGAATGATGCTAGACATTTAAAGCCTGAGCCTGTCTACAAGCGTCCATTCTGGACTGAGAGTTATGTGCAGTGGTCCCCCTTGGGGACTTACCTAGCCACAATTCACCGACAGGGTGCTGCAGTTTGGGGTGGAGCAGGTACCTTTAACCGTCTGATGCGCTTTGCCCATCCACAGGTTAAGTTAATTGATTTTTCACCTGGTGAGAAATATCTGGTTACTTACAGCAGCCATGAGCCCAGCAATCCTCGTGATGCAAATAGTGAAGGATGCTTACAACTTTCCATCATTGCTGACCATATGTTATTTCAGAGGATTGTCATCAATATTTTTGATGTAAGAACTGGAAAAGTTATGAGAGATTTCAAGGGAAGTCCTGATGATTTTGCCATTGGAGGAACTGGTGGTGTTGCGGGCGTATCTTGGCCTGTTTTTAGGTGGGGTGGTGGGAAAGATGATAAATACTTTGCCAGGATGGGGAAGAATGTAATTTCTGTCTATGAAACAGAGACTTTCTCCCTCATTGACAAAAAATCTTTGAAGGTTGAAAATGTTATGGATTTCTGCTGGTCCCCTACCGATCCCATTATTGCACTCTTTGTTCCTGAGCTAGGTGGTGGAAACCAACCGGCTAGGGTGAGTCTTGTGCAAATCCCGAGCAAAGAGGAGTTGAGACAGAAAAATCTTTTCAGTGTTAGCGATTGCAAAATGTACTGGCAAAGCAATGGGGATTATCTTGCTGTCAAGGTTGACCGATATACAAAGACCAAGAAAAGCATATACACAGGGTTTGAACTTTTCCGCATAAAAGAGCGGGATATACCTATTGAAGTGTTGGAGCTTGAGAATAAGAATGATAAGATCATTGCATTTGCCTGGGAGCCAAAGGGTCATAGGTTTGCAGTTATTCATGGTGACAACCCAAGGCCAGATATTAGCTTTTACTCCATGCGAAGCACTCACAACAGTGGCCGAGTGTCAAAACTTACAACTCTAAAAGGCAAGCAGGCCAATGCTCTTTTCTGGTCACCTTCTGGACGCTTCATCATTCTTGCTGGTCTGAAAGGTTTCAACGGACAGTTGGAATTCTACAATGTTGATGAGCTGGAGACAATGGCAACTGCTGAGCATTTCATGGCTACTGATATTGAATGGGATCCTACTGGACGGTATGTGGCAACTGCTGTAACTTCAGTTCACGAGATGGAAAATGGTTTCAACATATGGTCCTTTAATGGAAAGCTGCTGTATCGAGTCTTGAAGGACCATTTCTTTCAGTTCGCATGGCGGCCAAGACCACCATCCTTGTTGAGTTCGGAGAAAGAGGAAGAGATAGCAAAGAATTTGAAGAAGTACAGTAAGAAGTACGAGGCTGAAGATCAGGATGTATCTATGCTGCTGAGCGAGCAGGACCGGGAGAAGCGGAGAATGTTGAAGGAGGAGTGGGAGAAGTGGGTGAATGAATGGAAAAAATTGCATGAAGAAGAGAAGCAGTTGCGGCAAAAACTGCGGGATGGTGAAGCTAGTGATGAGGAAGAGGAATACGAAGCCAAAGAGGTTGAAGTAGAAGAGGTTTTGGATGTGTCGGAGGAAATTTTGTCTGTTGATTTTGGGCAGGAATGA 2250 44.04 MADVMLMKEIEDTAGRLGIDLSQVDFESIRLPPGEDFGIISDDEEVLQEESLEFDSGFGNIIVVGNLPVVPSEKFEKLEGVVRKIFGQIGVIKDDGLWMPVDPTTQKTLGYCFIEYGTPQRSESVSLNDIVIFWISTRHEAELAKEKTDGYKLDRAHIFAVNIFMKVPDKWAPPESNPYTPGENLQQWLMDEKARDQLVIRSGSDTEVFWNDARHLKPEPVYKRPFWTESYVQWSPLGTYLATIHRQGAAVWGGAGTFNRLMRFAHPQVKLIDFSPGEKYLVTYSSHEPSNPRDANSEGCLQLSIIADHMLFQRIVINIFDVRTGKVMRDFKGSPDDFAIGGTGGVAGVSWPVFRWGGGKDDKYFARMGKNVISVYETETFSLIDKKSLKVENVMDFCWSPTDPIIALFVPELGGGNQPARVSLVQIPSKEELRQKNLFSVSDCKMYWQSNGDYLAVKVDRYTKTKKSIYTGFELFRIKERDIPIEVLELENKNDKIIAFAWEPKGHRFAVIHGDNPRPDISFYSMRSTHNSGRVSKLTTLKGKQANALFWSPSGRFIILAGLKGFNGQLEFYNVDELETMATAEHFMATDIEWDPTGRYVATAVTSVHEMENGFNIWSFNGKLLYRVLKDHFFQFAWRPRPPSLLSSEKEEEIAKNLKKYSKKYEAEDQDVSMLLSEQDREKRRMLKEEWEKWVNEWKKLHEEEKQLRQKLRDGEASDEEEEYEAKEVEVEEVLDVSEEILSVDFGQE 749
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 119040 123869 - Carg24541-RA Car11g00027 155980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00027 749 MobiDBLite consensus disorder prediction 709 729 - -
Car11g00027 749 Hamap Eukaryotic translation initiation factor 3 subunit B [EIF3B]. 48 743 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Car11g00027 749 Pfam Eukaryotic translation initiation factor eIF2A 436 636 IPR013979 -
Car11g00027 749 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 60 146 IPR000504 GO:0003723
Car11g00027 749 Coils Coil 717 737 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g01034 Car-Chr9:7381151 Car11g00027 Car-Chr11:119040 0 dispersed
Car11g00027 Car-Chr11:119040 Car14g01268 Car-Chr14:10896154 3.87E-22 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00027 K03253 - csv:101213144 1308.89