Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00032 ATGGCCGCAACGAAGACGGATGTCGCCGCCAACGCCGTCGACGACCGTGTCTTGTCCACCGCTCAGCAGATCGTCAAGAGCCTCAATACTCCTAAAGAGGTTCGTGAGGACATGCTCTTGATACTCTCCAGTTTTGATAATCGACTTTCCAGTATCAGTAGTTTGATCAACAGTGACGACTCGAAAACCAAGAACGACAGGTTGGACGCCGCGGAGAAGGTGATTCTTCGTTGGGATCCTAATTTCGATGTGTCGAGACGGTCGCTTAATTGGGAGGACTCGCCGGACGAGGCGGCTGAGTATTTATCGGCGGTGGATGATATACTCCGGCTAGTAGAAGACCTTTCAATTGGGTCCGAGTCGACTGAGTTCGTAGACCGGGCCGAAAACGCGATCCAAATGGCGATGTGTCGGCTCGAGAGCGAATTCCGCCATATCCTGATCCAGAGCACAGTTCCTCTCGACGCCGAGCGGCTCTACGGCTCGATCCGAAGAGTTCACCTCTCGTTTGCGTCCAATTACAGTGAAATTGACGATGAATTCGAGAACTTCAGCGAGGACAGTCGCAGTTCGGGGCGATTCCATGAGCGAGGTGGGACAATTGGAGAAGATTCTTGGGTTGATTTGATCCATCCTGATGCGGCTGTTGATCTATCGGAGATTGCGGACCGTATGATTCGTTCCGGCTACGAAAAGGAATGTGTTCAAGTCTACAGCACGGTTCGTCGCGATGCTTTGGACGAGTGCTTGGCGATTCTTGGCGTCGAACGGCTCAGCATTGAGGAGGTTCAGAAAAGTGACTGGAAATTTTTGGACGATAAGATGAAGAAATGGATTCAGGCCGTAAAAGTTACAGTCCGGGTGATTTTGGTCGGTGAGAAGAGGCTGTGTGATCAGATCTTTAATGGCGCCCATGAATCCAAGGAGATTTGCTTTAACGAAACAGCCAAAGGGTGTGTAATGCAGCTGTTGAATTTCGGTGAGGCAGTGGCTATTGGGAAGAGGTCACCGGAGAAGCTGTTTCGAATCTTAGATATGTATGATGCTTTGGCCGGTGTTTTGCCCGACTTGGAAGCCATGGTTTCCGATGAGTTTCTGATTAGTGAAGCGCATGAAGTGTTGTCTGGACTGGGAGAAGCAGCCACAGGGACATTTGCAGAGTTTGAGAAAGCCATCGAAAGCGAAAATTCGAAGAAAGCGATGCAAAACGCCGAGATTCACCCGCTTATTCGATATGTAATGAATTATGTGAGATTGCTGGTTGATTACAGTAAGACAATGAACTCTCTTCTGGAAGACGAGGAACGCAGTGTGAACGACAATGACGATGATCTGCAGCTGGAAAGCACGTCGCCTTTAGCTCGTAGATTGTTGATGTTGTTATCGTCTTTGGAATCCAATCTTGTGGATAAATCAAAACTTTACGAGGATGTTGGGATGCAGTTCATATTTCTAATGAACAACATACTGTATATAGTGAAAAAAGTGAAAGATTGTGAGCTTGCCCAGCTGCTGGGCAGTAACTGGCTTCGCAGGCATAGCGGCCAAATTCGCCAATATGAAACGAGTTACCTTAGAGCCTCTTGGAGCAAGGTCTTGTGTTGCTTAAAGGATGAAGGCATTGGTGGGAGCACGAGCAATGCTGCCTCCAAGACGGCTTTGAAGGAAAAGTTCAAGAATTTCAATGCTGGGTTTGAGGAGATATGCAGGGCTCAGACGTCTTGGAAGGTATCGGATGCTCAACTGCGCGATGAGCTGATAATATCCGTTTCGGAGAAGGTGATCCCGGCGTATCGCTCCTTCTTGGGAAGGTTTAGAAATCAATTAGAGAGCGGAAGGCACTCTGGGAAGTACATAAAGTACACGCCCGACGACTTGGAGAACTCTCTATCGGATTTGTTTGAAGGATCACCTGCTGTTTCACATCACTTGCGAAGAAAGGGTACTTGA 1950 48.36 MAATKTDVAANAVDDRVLSTAQQIVKSLNTPKEVREDMLLILSSFDNRLSSISSLINSDDSKTKNDRLDAAEKVILRWDPNFDVSRRSLNWEDSPDEAAEYLSAVDDILRLVEDLSIGSESTEFVDRAENAIQMAMCRLESEFRHILIQSTVPLDAERLYGSIRRVHLSFASNYSEIDDEFENFSEDSRSSGRFHERGGTIGEDSWVDLIHPDAAVDLSEIADRMIRSGYEKECVQVYSTVRRDALDECLAILGVERLSIEEVQKSDWKFLDDKMKKWIQAVKVTVRVILVGEKRLCDQIFNGAHESKEICFNETAKGCVMQLLNFGEAVAIGKRSPEKLFRILDMYDALAGVLPDLEAMVSDEFLISEAHEVLSGLGEAATGTFAEFEKAIESENSKKAMQNAEIHPLIRYVMNYVRLLVDYSKTMNSLLEDEERSVNDNDDDLQLESTSPLARRLLMLLSSLESNLVDKSKLYEDVGMQFIFLMNNILYIVKKVKDCELAQLLGSNWLRRHSGQIRQYETSYLRASWSKVLCCLKDEGIGGSTSNAASKTALKEKFKNFNAGFEEICRAQTSWKVSDAQLRDELIISVSEKVIPAYRSFLGRFRNQLESGRHSGKYIKYTPDDLENSLSDLFEGSPAVSHHLRRKGT 649
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 171293 173242 + Carg20170-RA Car11g00032 155985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00032 649 Pfam Exo70 exocyst complex subunit 276 632 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car11g00032 Car13g00651 CCT
Car11g00032 Car18g00228 CCT
Car10g00053 Car11g00032 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00032 Car-Chr11:171293 Car14g01052 Car-Chr14:9233012 1.46E-151 dispersed
Car10g00053 Car-Chr10:236582 Car11g00032 Car-Chr11:171293 0 wgd
Car11g00032 Car-Chr11:171293 Car13g00651 Car-Chr13:8066683 0 wgd
Car11g00032 Car-Chr11:171293 Car18g00228 Car-Chr18:1303178 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00032 K07195 - csv:101205970 1097.42