Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00044 ATGGCGAGAGTTAACGACAATTGGGAGAGGCTAGTGCGTGCGACTCTGAAGAGAGAACAGCTCAGAAATGCAGGGCAAGGACATGGGAGGACTCCCAGTGGGATTGTTGGAGCTGTACCTCCTTCTCTTGGAAAAACCACCAACATTGATGCCATTTTGCAGGCTGCCGATGAAATCCAAGCGGAGGACTCCACTGTTGCCAGGATTTTGTGCGAGCAGGCATACAGAATGGCACAAAACTTAGATCCTAACAGTGATGGTAGAGGTGTTCTTCAGTTCAAGACTGGATTGATGTCTGTTATTAAGCAAAAACTTGTAAAGAAGGATGGAGCATCTATCAATCGTCATCGTGATATTGAACATTTGTGGGAGTTCTACAAGCTATATAAGAGACGACATAGAGTAGATGATATACAAAGAGAAGAACAGAAATGGCGGGAGTCCGGAGGAATCAGTGCGAACTTGGGAGAGTTGGAGCTCAGATATTCTGAAGCAAAGAAAGTAATGGCAAACCTTCGGGCTTTAGTTGAGGTGATGGATGCCCTCAAGGGAGATGCTGATCCTCAAGGCGTTGGAAGATTGATTATGGAGGAGCTACGAAGAGTTAGAAGTTCCGATACTACATTATCAGGGGAATTCGTACCCTACAATATTGTCCCTTTGGACGCCCAATCGATAACCAATGCCATTGGAATTTTCCCGGAAGTTAGGGCTACAATATCCGCAATCAGATATAATGAGCATTTCCCTACACTGCCTTCACAATTTCAGATATCTGGACAAAGGAGTGCAGATATGTTTGACCTTCTTGAATATATATTTGGATTCCAGAGAGACAACGTACGGAATCAACGAGAGCATGTGGTTCTCATGGTAGCGAATGCTCAATCTCGTCTTGGCAGTCCTGATAATGGTGATCCAAAAATAGATGAGAAAGCAATCAACGAGGTTTTCTTGAAGGTGCTTGATAACTACATCAAATGGTGTAAATACTTGCGTATTCGCCTTGCATGGAATAGCTTTGAGGCAATTAATAGGGACAGGAAGCTTTTCCTTGTTTCACTGTACTTGCTTATATGGGGTGAAGCTGCAAATGTCCGCTTCCTTCCTGAATGCATTTGCTATTTGTTCCATCATATGGCAAAAGAACTGGATGCTAACCTTGATCATGGAGAAGCAGTTCGTTCTGATAACTGTAAGCTGGAAGATGGTTCAGTGTCTTTCCTTCAACGAATCATTTGCCCTATATACGAGACACTTGTAGCTGAAACTGAAAGAAACAAAAATGGAAAAGCCGCACATTCAGAATGGAGGAACTATGATGATTTCAATGAATACTTTTGGTCACCTACTTGCTTCGAATTGGGCTGGCCAATGAGGGAGGAATCAAGTTTTTTACGGAAGCCTAGAGGCTCAAAACGGACTGGCAAGACTTCTTTTGTTGAGCATCGCACATTTTTTCACCTATACCGCAGTTTCCACCGTCTCTGGATCTTTTTGGCAGTTATATTCCAGGCTCTGACAATTTTTGCCTTCTATAATGAGCGTTTGAATTTGGAAACTTTGAAAGCTATTCTTAGCATTGGGCCAACATTTGCAATCATGAACTTCATCGAGAGTTGCTTAGATGTGTTGCTTACTTTTGGGGCATACACCACTGCAAGAGGGATGGCTATATCAAGGATTGTCATTAGGTTTTTCTGGTGGGGACTGAGTTCTGTTTTTGTGACCTATGTTTATGTGAAGGTTCTTGAAGAAAGAAATACTCGAAGCGCTGATAATTCATTCTATTTTCGGATATATATTATTGTGTTGGGTGTTTATGCTTCTTTACGCCTTGTGTTTTCAATGCTGCTAAAGTTACCTGCATGCCATACTCTATCTGAGATGTCAGATCAGTCTTTTTTTCAATTTTTCAAATGGATCTATCAGGAACGTTATTATGTCGGTCGTGGTCTATATGAAAAACTGAGTGATTATTGCAGATATGTAGCCTTTTGGCTGGTGCTCTTGACATGTAAATTCGTTTTTGCTTACTTTCTTCAGATTAAACCACTTGTCCAACCAACCACTGTCATTTTCAACCTTCCATCTCTTGAATATTCGTGGCATTCTTTCATTTCTAAGAACAATAATAACTTATCTACTATAGCTAGCTTATGGGCTCCTGTTGTGGCTCTCTATCTCTTGGACATTTACATATGGTACACCCTTTTGTCAGCCATTGTTGGTGGTGTAAAGGGTGCTCGGGCACGGTTGGGCGAGATACGTTCTCTTGAAATGATGCATAAGCGTTTCGAGAGCTTTCCAGAAGCATTTGTAAATAACCTTGTCTCTACAAAGACTAAAAGTTTGCTACCCGACAGACAAGAACCTCAGGACTCTCCGGAGAGGAACAAGGCATATGCGGCAACTTTTTCTCCATTTTGGAATGAAATCATTAAAAGCTTACGTGAGGAAGACTTCATCAGCAATAGGGAGATGGACTTGCTCTCTATTCCTAGCAACATAGGGAGCCTCAAATTGGTCCAATGGCCTTTGTTTCTATTATGTAGTAAGATATTCTTGGCTGTTGATTTGGCTTTGGATTGCCAAGATACGCAGAAAGATCTGTGGAGCAGAATATGTCGGGATGAGTATATGGAATATGCAGTTCAAGAATGCTACTACAGCGTTGAAAAAATTTTATATGCCCTTGTCGATGGTGAAGGGAGACTTTGGGTTGAAAGGATTTTTCGGGAGATCTTCAACAGTATTTCAGAGGGTTCCCTGGTTATAACATTGAACCTTAAGAAGATTCCAATTGTATTACAAAAGTTTACAGCACTTACAGGGCTTTTGACTCGAAAAGAAACTCCTGAACTCGCTAAAGGTGCTGCAAAAGCTGTATTTGAGCTTTATGATGTTGTTACAAACGAGCTGCTTTCATCAGATTTGAGGGAGCAGCTTGATACATGGAATATCTTGTTGAGGGCAAGAAATGAAGGTCGACTTTTTTCTCGGATCGAATGGCCCAAGGATCTAGAAATTAAAGAGCTTGTGAAGCGTCTGCATTTACTTCTTACAGTGAAGGATTCTGCAGCTAACATTCCGAAAAATCTTGAAGCAGGAAGAAGACTACAATTTTTTACAAATTCATTATTTATGGACATGCCTTTGGCAAAACCTGTCAGTGAAATGGTGCCATTCAGCGTCTTTACTCCATATTACAGTGAAACTGTGCTTTATAGTTCCTCTGAAATACGTATGGAAAACGAGGATGGCATATCCATTCTTTTCTATCTTCAGAAGATTTTTCCAGATGAATGGGAGAACTTTTTGGAACGAATTGGTCGAGGTCATGGCACGGGGGAGGCTGAGCTCCAAAAAAGTCCAAGCGATGCTTTAGAGCTTCGATTTTGGGTTTCATATCGAGGGCAGACTCTAGCTCGGACAGTTCGTGGTATGATGTACTACAGGAGAGCTTTAATGCTTCAGAGCTATCTGGAGAAGAGATCATTTGGGGATGATTATTCTCAAACCAACTTTTTCACGAGCCAAGGGTTTGAATTATCTCGAGAATCAAGGGCACAAGCAGACTTGAAGTTCACCTATGTTGTTTCCTGTCAAATATATGGGCAACAAAAGCAGAGAAAAGCTCCGGAGGCAACTGATATTGCTCTTTTGCTGCAGAGGAATGAGGGACTTCGTGTTGCTTTCATTCATGTGGAAGATAATGTTGGATCTGATGGGAAGGTTGTAAAGGAGTTTTATTCGAAGCTTGTGAAAGCTGATGTGCATGGAAAAGATCAGGAGGTATATTCGATCAAGCTTCCTGGAGAACCGAAGCTTGGAGAAGGGAAGCCTGAAAACCAAAATCATGCTATAGTTTTCACTCGTGGAGATGCCGTTCAAACTATTGACATGAACCAAGACAACTATCTTGAAGAGGCAATGAAAGTGAGAAATCTTCTGGAGGAATTTCATGCAAAGCATGGGCTTCGTCCTCCCACCATTCTAGGCGTGAGAGAGCATGTATTCACTGGAAGTGTCTCTTCATTAGCATGGTTCATGTCCAATCAAGAAACTAGCTTTGTAACCTTGGGACAACGTGTTTTGGCAAGTCCACTAAAAGTCCGAATGCATTATGGGCATCCTGATGTGTTTGACCGTATATTTCATATAACTCGAGGTGGCATTAGCAAGGCATCACGTGTGATCAACATTAGTGAGGATATATATGCAGGTTTCAACTCCACTTTGAGGCAGGGTAACATTACACACCATGAGTACATTCAGGTTGGAAAAGGAAGAGATGTTGGGTTAAACCAAATTGCCCTGTTTGAAGGGAAAGTAGCAGGTGGGAATGGAGAGCAAGTTCTCAGCAGGGATATTTACAGGCTTGGGCAACTTTTTGATTTCTTCAGAATGCTCTCATTTTATTTCACAACTGTTGGTTACTACGCATGCACAATGATGACAGTTCTTGTGGTTTATATATTCTTGTATGGACGGGTTTACTTGGCCTTTGCTGGACTTGATGAAGCAATCTCAAGAAGAGCAAAAATGTTGGGAAACACAGCATTGGATACCGCATTGAATGCTCAGTTTTTGTTTCAGATTGGAGTTTTCACTGCAGTCCCTATGATAATGGGTTTTATACTTGAACTTGGACTGATGAAGGCTGTTTTTAGCTTCATAACTATGCAGCTTCAGTTGTGTTCTGTCTTCTTCACTTTCTCTTTGGGAACTAGAACTCATTATTTTGGAAGAACTATTCTCCATGGTGGTGCCAAGTATCGAGCAACTGGTAGAGGTTTCGTGGTCCAGCACATCAAATTTGCTGAAAACTATCGCCTCTACTCAAGAAGTCATTTCATCAAGGCGCTTGAGGTGGCATTGCTTCTTATTGTCTACATTGCCTATGGGTATTCAGAAGGCGGAGCAAGTTCTTTTGTTTTGCTTACTCTCAGCAGTTGGTTCCTCGTCATCTCGTGGCTCTTTGCTCCTTATATCTTCAATCCATCTGGTTTTGAGTGGCAAAAGACTGTGGAGGATTTTGATGATTGGACCAGCTGGCTATTCTACAAAGGGGGAGTAGGGGTTAAGGGAGAAAACAGTTGGGAGTCATGGTGGGATGAAGAACAGGCACATATTCAAACATTGCGAGGTCGAATTTTGGAGACACTTTTGACTGTGAGGTTCTTTATATTTCAATATGGCGTTGTGTACAAACTCCATCTCACAGGAAAGGACACATCACTTGCGTTATATGGTTTCTCGTGGGTGGTGCTTGTTGGAATTGTTTTGATATTCAAGATCTTCACCTTCAGTCCTAAAAAATCAACGAACTTCCAGCTATTGATGAGATTTATTCAGGGTGTCACAGCCATAATTCTGGTTACAGCGCTTGGTCTAATCGTTGGCTTTACTAACCTGTCGATAACCGACTTATTTGCTAGCGTTCTGGCATTTATTCCGACTGGATGGGCTATGTTATCTTTGGCAGTTACTTGGAAGAGAGTAGTGAGGAGTCTAGGCTTGTGGGACTCGGTGCGTGAATTTGCCAGGATGTATGATGCTGGGATGGGTTTGATAATATTCGTGCCCATCGCATTCTTGTCCTGGTTTCCATTCATTTCCACATTCCAGTCTCGTCTGCTCTTCAACCAAGCTTTCAGCCGTGGGCTCGAGATCTCGCTCATCCTTGCTGGAAACAAAGCTAACGTTGAGACGTACTGA 5721 41.99 MARVNDNWERLVRATLKREQLRNAGQGHGRTPSGIVGAVPPSLGKTTNIDAILQAADEIQAEDSTVARILCEQAYRMAQNLDPNSDGRGVLQFKTGLMSVIKQKLVKKDGASINRHRDIEHLWEFYKLYKRRHRVDDIQREEQKWRESGGISANLGELELRYSEAKKVMANLRALVEVMDALKGDADPQGVGRLIMEELRRVRSSDTTLSGEFVPYNIVPLDAQSITNAIGIFPEVRATISAIRYNEHFPTLPSQFQISGQRSADMFDLLEYIFGFQRDNVRNQREHVVLMVANAQSRLGSPDNGDPKIDEKAINEVFLKVLDNYIKWCKYLRIRLAWNSFEAINRDRKLFLVSLYLLIWGEAANVRFLPECICYLFHHMAKELDANLDHGEAVRSDNCKLEDGSVSFLQRIICPIYETLVAETERNKNGKAAHSEWRNYDDFNEYFWSPTCFELGWPMREESSFLRKPRGSKRTGKTSFVEHRTFFHLYRSFHRLWIFLAVIFQALTIFAFYNERLNLETLKAILSIGPTFAIMNFIESCLDVLLTFGAYTTARGMAISRIVIRFFWWGLSSVFVTYVYVKVLEERNTRSADNSFYFRIYIIVLGVYASLRLVFSMLLKLPACHTLSEMSDQSFFQFFKWIYQERYYVGRGLYEKLSDYCRYVAFWLVLLTCKFVFAYFLQIKPLVQPTTVIFNLPSLEYSWHSFISKNNNNLSTIASLWAPVVALYLLDIYIWYTLLSAIVGGVKGARARLGEIRSLEMMHKRFESFPEAFVNNLVSTKTKSLLPDRQEPQDSPERNKAYAATFSPFWNEIIKSLREEDFISNREMDLLSIPSNIGSLKLVQWPLFLLCSKIFLAVDLALDCQDTQKDLWSRICRDEYMEYAVQECYYSVEKILYALVDGEGRLWVERIFREIFNSISEGSLVITLNLKKIPIVLQKFTALTGLLTRKETPELAKGAAKAVFELYDVVTNELLSSDLREQLDTWNILLRARNEGRLFSRIEWPKDLEIKELVKRLHLLLTVKDSAANIPKNLEAGRRLQFFTNSLFMDMPLAKPVSEMVPFSVFTPYYSETVLYSSSEIRMENEDGISILFYLQKIFPDEWENFLERIGRGHGTGEAELQKSPSDALELRFWVSYRGQTLARTVRGMMYYRRALMLQSYLEKRSFGDDYSQTNFFTSQGFELSRESRAQADLKFTYVVSCQIYGQQKQRKAPEATDIALLLQRNEGLRVAFIHVEDNVGSDGKVVKEFYSKLVKADVHGKDQEVYSIKLPGEPKLGEGKPENQNHAIVFTRGDAVQTIDMNQDNYLEEAMKVRNLLEEFHAKHGLRPPTILGVREHVFTGSVSSLAWFMSNQETSFVTLGQRVLASPLKVRMHYGHPDVFDRIFHITRGGISKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDIYRLGQLFDFFRMLSFYFTTVGYYACTMMTVLVVYIFLYGRVYLAFAGLDEAISRRAKMLGNTALDTALNAQFLFQIGVFTAVPMIMGFILELGLMKAVFSFITMQLQLCSVFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVVQHIKFAENYRLYSRSHFIKALEVALLLIVYIAYGYSEGGASSFVLLTLSSWFLVISWLFAPYIFNPSGFEWQKTVEDFDDWTSWLFYKGGVGVKGENSWESWWDEEQAHIQTLRGRILETLLTVRFFIFQYGVVYKLHLTGKDTSLALYGFSWVVLVGIVLIFKIFTFSPKKSTNFQLLMRFIQGVTAIILVTALGLIVGFTNLSITDLFASVLAFIPTGWAMLSLAVTWKRVVRSLGLWDSVREFARMYDAGMGLIIFVPIAFLSWFPFISTFQSRLLFNQAFSRGLEISLILAGNKANVETY 1906
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 227521 259105 - Carg20182-RA Car11g00044 155997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00044 1906 Coils Coil 155 175 - -
Car11g00044 1906 Pfam 1,3-beta-glucan synthase component 1030 1724 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Car11g00044 1906 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 349 457 IPR026899 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00044 Car-Chr11:227521 Car11g00696 Car-Chr11:3912180 0 dispersed
Car11g00697 Car-Chr11:3938487 Car11g00044 Car-Chr11:227521 2.10E-81 dispersed
Car11g00698 Car-Chr11:3952502 Car11g00044 Car-Chr11:227521 8.11E-58 dispersed
Car11g00701 Car-Chr11:3988840 Car11g00044 Car-Chr11:227521 3.89E-79 dispersed
Car11g00700 Car-Chr11:3981260 Car11g00044 Car-Chr11:227521 2.12E-11 transposed
Car10g00065 Car-Chr10:298609 Car11g00044 Car-Chr11:227521 4.64E-16 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00044 K11000 - csv:101217890 3616.24