Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00053 ATGGCATTCCCTTCCTCCAAACTCCTTCCCTTCTTCGCCCTTCTCCCCCTCCTCCTCCAAGTCTATGCCCGACCGAGCCTTGTTCCTTCGGATCTTAGAGCCTTTAATGTCATCGAGAATGACTTGGGCATTGACGCTCAACTCACCTCCTCCCCATGCGACCTCGCCGGTGTCTTCTGCGAGCGCCGGCTCTCCAACAATGGCACTTATGTATTGAGGATCACCAGGCTCATTTTCAAGTCCGAAGGTCTCACCGGTTCTCTTTCTCCAGCTATTGGGCGACTGACGGAGTTGAAACAGCTTACGGTTTCTGACAACCACCTCGTTGGCCACGTACCTGCACAGATTGTTGACTGCCGGAAACTGGAAATTCTCCATCTCCAAAGCAACCAGTTTTCTGGCAAAGTTCCATCTGGGTTGTCCTCGTTGATTCGCCTTCGAGACATGGATCTTTCGTCCAATAAATTCTCGGGGAGTTTGGATTTCTTGAAGCATTTCCCCAACTTGGAAAGTCTTTCTATTGCCAATAATTACTTCACGGGGAAGATCCCAGCTTCAATTCGGTCTTTTCGCAATCTTCGAGTCTTCAACTTCTCTGGAAATCGCCTTCTCGAAAGCTCAGCCCCTGTCGTGAAAGGCGTCGAGCTCTACTCGGCAACCAGTGTCCTCAAGCGTTATAAGTTAGCTGAGAATTCCACTACGAAAGGTAAGCCCAGTGCCGCGGCCACAGCACCAACTTCGAGTGCTCAAGCTCCATCTCCCGCAGCATCCCCTCGTAAGCATCGGGAAAATAAAGCAGGAAAGGTATTAGGTTGGCTACTTGGATTGCTCGCAGGAGCAATTGCTGGAACTTTGTCAGGGTTGATCTTTTCTCTACTGTTTAAAATCATCATAGCAGTTATAAAAGGTGGAACCAAGAATTCGGGCCACTCAATCTATGCTCCTAAGCTAATAAAACGAGAGGATTTGGCTTTTCTAGAGAAAGACGATGTGCTTGCATCACTCGAGATGATTGGTAAAGGAGGATGTGGAGAAGTTTACAAGGCCGAATTACCAGAAAAAAGCGGGAGAATGTTTGCGATAAAGAAGATAGCTCAACCCCCGAAGGAAGCGGCCGAGTTAGCTGACGAGGAAAGCAAGTTTATGAACAAGAAAATGCAACAGATCAAGTCAGAGATTAGAACTGTGGGTGAAATCCGGCATCGGAATCTTCTTCCTCTTGTAGCCCATGTACTCCGTCCCGACTGCCACTACCTTGTGTATGAATTGATGAAGAATGGCAGCTTGCAAGACATGTTGAATCAGGTTTCGGCAGGAGCGAAAGAACTAGATTGGCTTACTCGCCATAAGATCGCTCTCGGAGTGGCATCTGGGCTGGAGTATCTTCACATGAACCATACCCCACGTATTATTCACAGGGATCTGAAGCCTGCAAATGTTTTGCTCGACGACAACATGGAAGCTCGAATTGCTGATTTTGGGCTGGCAAAAGTAATGCCAGATGCTCAAACTCACATGACGGCTTCCAATGTTGCAGGTACCGTAGGATACATCGCACCAGAGTATCATCAGACCTTAAAGTTCACTGATAAGTGCGATATATACGCCTTTGGGGTTCTGCTAGGGGTCTTGGTGATTGGGAAACTTCCATCTCATGAGTTTTTCCGGGACACGGATGAGATGAGTTTGGTCAAGTGGATGAGGAATGTTATGACTTCGGATAATCCTAGGAGAGCCATTGATCCGAAGCTCCTGGGAAATGGCTGGGAGGAGCAAATGCTCTTGGCTCTCAAAATTGCTTGCTTCTGCACTATGGATAATCCAAAAGAGAGGCCTAACAGTAAGGATGTCAGATGCATGCTATTACAGATTAAGCATGATGTACCTGAAACTCCCTCTTCTCGGAACATCTAA 1914 47.54 MAFPSSKLLPFFALLPLLLQVYARPSLVPSDLRAFNVIENDLGIDAQLTSSPCDLAGVFCERRLSNNGTYVLRITRLIFKSEGLTGSLSPAIGRLTELKQLTVSDNHLVGHVPAQIVDCRKLEILHLQSNQFSGKVPSGLSSLIRLRDMDLSSNKFSGSLDFLKHFPNLESLSIANNYFTGKIPASIRSFRNLRVFNFSGNRLLESSAPVVKGVELYSATSVLKRYKLAENSTTKGKPSAAATAPTSSAQAPSPAASPRKHRENKAGKVLGWLLGLLAGAIAGTLSGLIFSLLFKIIIAVIKGGTKNSGHSIYAPKLIKREDLAFLEKDDVLASLEMIGKGGCGEVYKAELPEKSGRMFAIKKIAQPPKEAAELADEESKFMNKKMQQIKSEIRTVGEIRHRNLLPLVAHVLRPDCHYLVYELMKNGSLQDMLNQVSAGAKELDWLTRHKIALGVASGLEYLHMNHTPRIIHRDLKPANVLLDDNMEARIADFGLAKVMPDAQTHMTASNVAGTVGYIAPEYHQTLKFTDKCDIYAFGVLLGVLVIGKLPSHEFFRDTDEMSLVKWMRNVMTSDNPRRAIDPKLLGNGWEEQMLLALKIACFCTMDNPKERPNSKDVRCMLLQIKHDVPETPSSRNI 637
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 300719 302632 - Carg20191-RA Car11g00053 156006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00053 637 MobiDBLite consensus disorder prediction 234 263 - -
Car11g00053 637 ProSiteProfiles Protein kinase domain profile. 332 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g00053 637 Pfam Protein kinase domain 335 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g00053 637 Pfam Leucine Rich Repeat 168 189 IPR001611 GO:0005515
Car11g00053 637 MobiDBLite consensus disorder prediction 234 254 - -
Car11g00053 637 Coils Coil 372 392 - -
Car11g00053 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00073 Car11g00053 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00053 Car-Chr11:300719 Car02g01469 Car-Chr2:9585363 1.68E-06 dispersed
Car10g00073 Car-Chr10:327999 Car11g00053 Car-Chr11:300719 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89153 PF00069 Pkinase 1.80E-42 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00053 - - cpep:111793199 1126.69