Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car11g00060 | ATGGTAGGCACTGTGACACTAAGACAAGGGGAGAAGAAACATTACAACCATAAAGTGGATGCCTATAGCTTTGCCATTGTGTTGTGGGAACTGCTACACAACAAGTTGCCATTTGAAGGCATGTCAAATCTTCAAGCGGCCTATGCAGCTGCTTTTAAGAATGTAAGGCCTAGTGCAGACAATCTTCCTGAGGAACTGGCTATCCTTCTAACATCTTGTTGGCAAGAGGATGCAAATGCACGTCCAAACTTCACCCAAATCATCCAAATGCTACTCACTTACTTTTACACCATTGCACCCCCCGAGCCGATGATTCCTTCCCGAGTTTTCACTTCTGAGAACACGGTGTTTCCTCCCGAGTCTCCCGGAACAAGCTCACTGATGGCAGTCCGGTACGATTCGGGGGACACTCAAAAAGCTAAAATGGAAAATAAGGCCAGAGGTTGTTTCTTCTGCTCCACTGATTGTTACTAA | 474 | 45.99 | MVGTVTLRQGEKKHYNHKVDAYSFAIVLWELLHNKLPFEGMSNLQAAYAAAFKNVRPSADNLPEELAILLTSCWQEDANARPNFTQIIQMLLTYFYTIAPPEPMIPSRVFTSENTVFPPESPGTSSLMAVRYDSGDTQKAKMENKARGCFFCSTDCY | 157 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 334803 | 335611 | - | Carg20198-RA | Car11g00060 | 156013 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car11g00060 | 157 | Pfam | Protein tyrosine and serine/threonine kinase | 12 | 91 | IPR001245 | GO:0004672|GO:0006468 | |
Car11g00060 | 157 | ProSiteProfiles | Protein kinase domain profile. | 1 | 95 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car10g00081 | Car11g00060 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car11g00060 | Car-Chr11:334803 | Car06g00170 | Car-Chr6:1018365 | 6.02E-44 | dispersed | |
Car10g00081 | Car-Chr10:365566 | Car11g00060 | Car-Chr11:334803 | 9.19E-100 | wgd | |
Car11g00060 | Car-Chr11:334803 | Car14g00615 | Car-Chr14:3451017 | 2.15E-76 | wgd | |
Car11g00060 | Car-Chr11:334803 | Car04g02582 | Car-Chr4:20304173 | 8.39E-65 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
89154 | PF07714 | PK_Tyr_Ser-Thr | 9.10E-15 | CL0016 | Car | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car11g00060 | - | - | csv:101223021 | 297.745 |