Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00060 ATGGTAGGCACTGTGACACTAAGACAAGGGGAGAAGAAACATTACAACCATAAAGTGGATGCCTATAGCTTTGCCATTGTGTTGTGGGAACTGCTACACAACAAGTTGCCATTTGAAGGCATGTCAAATCTTCAAGCGGCCTATGCAGCTGCTTTTAAGAATGTAAGGCCTAGTGCAGACAATCTTCCTGAGGAACTGGCTATCCTTCTAACATCTTGTTGGCAAGAGGATGCAAATGCACGTCCAAACTTCACCCAAATCATCCAAATGCTACTCACTTACTTTTACACCATTGCACCCCCCGAGCCGATGATTCCTTCCCGAGTTTTCACTTCTGAGAACACGGTGTTTCCTCCCGAGTCTCCCGGAACAAGCTCACTGATGGCAGTCCGGTACGATTCGGGGGACACTCAAAAAGCTAAAATGGAAAATAAGGCCAGAGGTTGTTTCTTCTGCTCCACTGATTGTTACTAA 474 45.99 MVGTVTLRQGEKKHYNHKVDAYSFAIVLWELLHNKLPFEGMSNLQAAYAAAFKNVRPSADNLPEELAILLTSCWQEDANARPNFTQIIQMLLTYFYTIAPPEPMIPSRVFTSENTVFPPESPGTSSLMAVRYDSGDTQKAKMENKARGCFFCSTDCY 157
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 334803 335611 - Carg20198-RA Car11g00060 156013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00060 157 Pfam Protein tyrosine and serine/threonine kinase 12 91 IPR001245 GO:0004672|GO:0006468
Car11g00060 157 ProSiteProfiles Protein kinase domain profile. 1 95 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00081 Car11g00060 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00060 Car-Chr11:334803 Car06g00170 Car-Chr6:1018365 6.02E-44 dispersed
Car10g00081 Car-Chr10:365566 Car11g00060 Car-Chr11:334803 9.19E-100 wgd
Car11g00060 Car-Chr11:334803 Car14g00615 Car-Chr14:3451017 2.15E-76 wgd
Car11g00060 Car-Chr11:334803 Car04g02582 Car-Chr4:20304173 8.39E-65 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89154 PF07714 PK_Tyr_Ser-Thr 9.10E-15 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00060 - - csv:101223021 297.745